Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte4g01021 | ATGGCTTATGCAGGAAAGAAAGGTAATGACTTTTATGCAGTGTTGGGGTTGGATAAAAAGTGCACATCCTCAGAGCTCAGAAACGCATATAAGATACTAGCACTGAAATGGCATCCAGATCGGTGTTCAGCATCAGGGAACTCAAAATTCGTTGAAGAAGCTAAGAATAAATTCCAGGCGATTCAGCAAGCCTATTCCGTTTTATCTGATGAAAACAAGAGGCTTATGTACGACGTAGGCGTTTATGACAGTGATGATGACGAAAATGGTATGGGAGACTTTTTGAACGAGATGGCTACAATGATGAGCCAAACGAAACCAAACGAAAATGGAGAGGAGAGCTTTCAGCAGTTGCAAGATTTGTTTAACGAAATGCTCCAAGAAAACATGGAGACATTCGAGAGTAGCTCTCATTCTACAACTACCTTTTGTACTACTACTACATCTACATACAGTAGCTACTCTGAGAGTTCCAGCTCCAGTAACAAACGCAGCTCTTCTCAAATGAGTTATGGTAACTCTGAATATCTATCCAGCTTCGACAACGACTACCAGACTTTCTGTTTTGGGGTGGAACACAGACAAGATACAAAGAAGGCAAAGGGAGTAGGAGTAGGAACTCTGGCGGGGGTCCGCAATAGTAATAGACGTTGGCATGGTAGGAAACTGAGAGTTTCAGCCGTCCATGATGTCTCAACCTATGACTTCAGCTCTGTAACAGCACAGGGGCGACTCATATAG | 741 | 0.4305 | MAYAGKKGNDFYAVLGLDKKCTSSELRNAYKILALKWHPDRCSASGNSKFVEEAKNKFQAIQQAYSVLSDENKRLMYDVGVYDSDDDENGMGDFLNEMATMMSQTKPNENGEESFQQLQDLFNEMLQENMETFESSSHSTTTFCTTTTSTYSSYSESSSSSNKRSSSQMSYGNSEYLSSFDNDYQTFCFGVEHRQDTKKAKGVGVGTLAGVRNSNRRWHGRKLRVSAVHDVSTYDFSSVTAQGRLI* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte4g01021 | 246 | CDD | DnaJ | 10 | 70 | IPR001623 | - | |
| Pte4g01021 | 246 | Pfam | DnaJ domain | 10 | 78 | IPR001623 | - | |
| Pte4g01021 | 246 | SUPERFAMILY | Chaperone J-domain | 7 | 80 | IPR036869 | - | |
| Pte4g01021 | 246 | Coils | Coil | 51 | 71 | - | - | |
| Pte4g01021 | 246 | Gene3D | DnaJ domain | 7 | 138 | IPR036869 | - | |
| Pte4g01021 | 246 | PRINTS | DnaJ domain signature | 12 | 30 | IPR001623 | - | |
| Pte4g01021 | 246 | PRINTS | DnaJ domain signature | 53 | 73 | IPR001623 | - | |
| Pte4g01021 | 246 | PRINTS | DnaJ domain signature | 30 | 45 | IPR001623 | - | |
| Pte4g01021 | 246 | PRINTS | DnaJ domain signature | 73 | 92 | IPR001623 | - | |
| Pte4g01021 | 246 | SMART | dnaj_3 | 9 | 73 | IPR001623 | - | |
| Pte4g01021 | 246 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 4 | 197 | - | - | |
| Pte4g01021 | 246 | ProSiteProfiles | dnaJ domain profile. | 10 | 81 | IPR001623 | - | |
| Pte4g01021 | 246 | ProSitePatterns | Nt-dnaJ domain signature. | 58 | 77 | IPR018253 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte4g01021 | Pte-Chr4 | 41380898 | 41384146 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte4g01021 | 12 | 78 | C2H2 Transcription Factor Family | AT1G74250 | 44.118 | 1.71e-09 | 55.8 |