Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01009 ATGTTGGAGAATAGATGGTCAGTGCTGGTGTTCATTAGCAGCTGCCTTCTGAGTTGGATGCCCATTTTCATCAATGGTGCCACAGATCCAAATGATGCTGCTGCATTGAGGGTCATGTACTCTGGTATGAATTCGCCAGCACAATTGACTCAATGGAGTGCTAATGGTGATGATCCTTGTGGACAATCTTGGAAAGGCGTTGTCTGCTCAGACTCACGGGTGACAGAAATTAAATTGGCTGGGCTTGGCCTTTCTGGGAATATTGGATACCAGCTTGATAAATTGTCATCTTTAACAAACCTAGACTTAAGTAACAATATGCTTGGAGGTGATCTACCTTTTCAACTGCCTCCACATGTGCAGCAATTAAATCTTGCTAATAATAAATTCACTGGTGGCTTCCCTTATTCAATTTCTCAGATTTCTTCTCTTCAATACCTAAATCTTGGTCACAATCAGATACAAGGTCAACTCAATAACATCTTTGGGCAACTTAATTCTCTCTCCACATTGGATCTCTCTTTCAATTCTCTGACGGGTAACCTACCTCAGAGTTTCAGCTCTCTCTCCAACTTGGATACATTGTATCTGCAAAACAACCAGTTTACTGGCACCATTGACGTTCTCTCCAGTTTGCCCCTTAATAATCTGAATGTGGAAAATAACCATTTTACTGGCTGGATACCTGATCAATTGAAAGGCATTGACTTACAGACGGGTGGTAATTCTTGGAGCTCGGGAGCAGCTCCCCCACCTCCACCTGGTACACCTCCAACAACAAAAAAGACTCCAAGTCATAAATCTGGCAATGGGAATAGTCCCTCAGATAATGGAGGAAATAGTAAATCAGGTATAGGAGGTGGTGCAATTGCTGGCATAATCATATCCATTCTCGTTGTTGGGGCGATAGTAACATTCTTCTTGTTGAAGAGAAGATCCAGGAGGTCATCTCCTGACCCTGAAAAGATTGATAATCAACCGTTTACTGCCCATTCAATTAATGAGGTGCAGGAAATGAAACCTTCACAGGCTTCTTCTGTACTTGATCTGAAGACATTTGAAGATCATACAGCAATAAATCTTAGACCTCCACCTATTGAGCGACTTAAATCATTTGACGAAAAAGAATTTGTGAAGAAGCCAGCTGTTGTCAAAAAACCTGTCAAAGTTCCTTCAAATGTGAAATCTTATTCTGTAGCGGACCTTCAGATTGCTACTGGCAGCTTCAATATTGAAAACCTTCTAGGCGAGGGATCTTTTGGGCGTGTATACCGTGCTCAATTTGGAGATGGGAAGGTTTTTGCTGTGAAGAAAATCGATTCATCCGTCCTTCGAAATGAAATATCTGAATATTTCATAGAGATAGTTTCAAGCATCTCTCATTTGCATCACCCAAATGTGACTGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACATCTCCTAGTGAATGAATATCACAAAAGTGGGTCACTGCATGACTATCTGCACTTGTCCGATGAATACAGCAGGCCCTTAATATGGAATACTCGTGTCAAAATTGCCTTGGGCACTGCACGTGCTCTGGAGTACCTACATGAAGTCTGCTCACCATCAATTGTTCACAAAAATATAAAATCAGGGAACATTCTTCTAGATGCAGAGCTCAACCCCCACCTTTCAGACTGTGGATTGGCTTGCTATATTCCAAATGCTGATGAGATATTGAATCAAAATTCTGGATCTGGATACAGTGCACCTGAAGTAGCCATGTCTGGTCAGTATAATCTGAAAAGTGATGTCTACAGTTTTGGAGTAGTCATGTTGGAGCTTCTGACTGGACGTAGACCATTTGACAGTTCAAGGCCAAGATCTGAACAGTCATTGGTTCGGTGGGCAACACCTCAGCTTCATGACATTGACGCTCTAGAAAAGATGGTTGATCCAGCACTCAAAGGACTCTACCCTGTCAAATCTCTTTCCCGGTTTGCTGATGTAATTGCACTCTGCGTCCAGCCTGAACCTGAATTCAGGCCTCCAATGTCAGAAGTGGTACAAGCATTGGTTACGCTGGTACAGCGAGCTAACATGAGCAAGAGAACAACTGGAAGTGATCAAGGAGGAAGCCAGAGGGGTGAAAGTGCAGAAAGGAATGAGTAA 2139 0.4254 MLENRWSVLVFISSCLLSWMPIFINGATDPNDAAALRVMYSGMNSPAQLTQWSANGDDPCGQSWKGVVCSDSRVTEIKLAGLGLSGNIGYQLDKLSSLTNLDLSNNMLGGDLPFQLPPHVQQLNLANNKFTGGFPYSISQISSLQYLNLGHNQIQGQLNNIFGQLNSLSTLDLSFNSLTGNLPQSFSSLSNLDTLYLQNNQFTGTIDVLSSLPLNNLNVENNHFTGWIPDQLKGIDLQTGGNSWSSGAAPPPPPGTPPTTKKTPSHKSGNGNSPSDNGGNSKSGIGGGAIAGIIISILVVGAIVTFFLLKRRSRRSSPDPEKIDNQPFTAHSINEVQEMKPSQASSVLDLKTFEDHTAINLRPPPIERLKSFDEKEFVKKPAVVKKPVKVPSNVKSYSVADLQIATGSFNIENLLGEGSFGRVYRAQFGDGKVFAVKKIDSSVLRNEISEYFIEIVSSISHLHHPNVTELVGYCSEHGQHLLVNEYHKSGSLHDYLHLSDEYSRPLIWNTRVKIALGTARALEYLHEVCSPSIVHKNIKSGNILLDAELNPHLSDCGLACYIPNADEILNQNSGSGYSAPEVAMSGQYNLKSDVYSFGVVMLELLTGRRPFDSSRPRSEQSLVRWATPQLHDIDALEKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVTLVQRANMSKRTTGSDQGGSQRGESAERNE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01009 712 CDD STKc_IRAK 415 681 - -
Pte4g01009 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 695 - -
Pte4g01009 712 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Pte4g01009 712 MobiDBLite consensus disorder prediction 689 704 - -
Pte4g01009 712 PRINTS Leucine-rich repeat signature 98 111 - -
Pte4g01009 712 PRINTS Leucine-rich repeat signature 165 178 - -
Pte4g01009 712 Gene3D Phosphorylase Kinase; domain 1 372 486 - -
Pte4g01009 712 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672|GO:0006468
Pte4g01009 712 MobiDBLite consensus disorder prediction 239 281 - -
Pte4g01009 712 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g01009 712 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Pte4g01009 712 ProSiteProfiles Leucine-rich repeat profile. 191 213 IPR001611 GO:0005515
Pte4g01009 712 SMART LRR_typ_2 95 119 IPR003591 -
Pte4g01009 712 SMART LRR_typ_2 141 164 IPR003591 -
Pte4g01009 712 SMART LRR_typ_2 189 212 IPR003591 -
Pte4g01009 712 SMART LRR_typ_2 165 188 IPR003591 -
Pte4g01009 712 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Pte4g01009 712 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Pte4g01009 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Pte4g01009 712 PANTHER LEUCINE RICH REPEAT KINASE 2 69 688 - -
Pte4g01009 712 MobiDBLite consensus disorder prediction 261 281 - -
Pte4g01009 712 SUPERFAMILY L domain-like 29 232 - -
Pte4g01009 712 Gene3D Ribonuclease Inhibitor 181 246 IPR032675 -
Pte4g01009 712 MobiDBLite consensus disorder prediction 689 712 - -
Pte4g01009 712 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 486 - -
Pte4g01009 712 Gene3D Transferase(Phosphotransferase) domain 1 488 705 - -
Pte4g01009 712 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01009 Pte-Chr4 41273610 41280507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01009 1 709 Strubbelig Receptor Gene Family AT1G53730 67.917 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte4g01009 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01009 - - qsa:O6P43_027468 1009.98