Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g01008 ATGTTGGCGGATAGATGGTCAGTGCTGGTGTTCATTAGCAGCTGCCTTCTGAGTTGGATGCCCATTTTCATCAATGGTGCCACATATCCAAATGATGCTGCTGCATTGAGGAGCATGTACTCTGGTATGAATTCGCCAACACAATTGACTCAATGGAGTGCTAATGGTGATGATCCTTGTGGACAATCTTGGAGAGGCGTTGTCTGCTCAGACTCACGGGTGACAGAAATTAAATTGGCTGGGCTTGGCCTTTCTGGGAATATTGGATACCAGCTTGATAAATTGTCATCTTTAACAAACCTAGACTTAAGTAACAATACACTTGGAGGTGATATACCTTTTCAACTGCCTCCACATGTGCAGCAATTAAATCTTGCTAATAATAAATTCACTGGTGGCGTCCCTTATTCAATTTCTCAGATGTCTTCTCTTCAATACCTAAATCTTGGTCACAATCAGATACAAGGTCAACTCAATGACTTGTTTGGGCAACTTAATTCTCTCTCCACATTGGATCTCTCTTTCAATTCTCTGACGGGTAAGCTACCTCAGAGTTTCAGCTCTCTCTCAAACTTGGATACATTGTATCTGCAAAACAACCAGTTTACTGGCACCATTGACGTCCTGTCCAGTTTGCCCCTTAATAATCTGAATGTGGAAAATAACCATTTTACTGGCTGGATACCTGATCAATTGAAAGGCATTGACTTACAGACGGGTGGTAATTCTTGGAGCTCGGGAGTAGCTCCCCGTCCTCCACCTGGTACACCTCCAACAACAAAAAAGACTCCCAAGTCATAA 801 0.4282 MLADRWSVLVFISSCLLSWMPIFINGATYPNDAAALRSMYSGMNSPTQLTQWSANGDDPCGQSWRGVVCSDSRVTEIKLAGLGLSGNIGYQLDKLSSLTNLDLSNNTLGGDIPFQLPPHVQQLNLANNKFTGGVPYSISQMSSLQYLNLGHNQIQGQLNDLFGQLNSLSTLDLSFNSLTGKLPQSFSSLSNLDTLYLQNNQFTGTIDVLSSLPLNNLNVENNHFTGWIPDQLKGIDLQTGGNSWSSGVAPRPPPGTPPTTKKTPKS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g01008 266 MobiDBLite consensus disorder prediction 250 266 - -
Pte4g01008 266 MobiDBLite consensus disorder prediction 239 266 - -
Pte4g01008 266 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Pte4g01008 266 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 234 IPR046959 -
Pte4g01008 266 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pte4g01008 266 PRINTS Leucine-rich repeat signature 98 111 - -
Pte4g01008 266 PRINTS Leucine-rich repeat signature 165 178 - -
Pte4g01008 266 ProSiteProfiles Leucine-rich repeat profile. 143 165 IPR001611 GO:0005515
Pte4g01008 266 SUPERFAMILY L domain-like 28 232 - -
Pte4g01008 266 ProSiteProfiles Leucine-rich repeat profile. 191 213 IPR001611 GO:0005515
Pte4g01008 266 Gene3D Ribonuclease Inhibitor 181 246 IPR032675 -
Pte4g01008 266 SMART LRR_typ_2 165 188 IPR003591 -
Pte4g01008 266 SMART LRR_typ_2 95 119 IPR003591 -
Pte4g01008 266 SMART LRR_typ_2 189 212 IPR003591 -
Pte4g01008 266 SMART LRR_typ_2 141 164 IPR003591 -
Pte4g01008 266 Gene3D Ribonuclease Inhibitor 30 180 IPR032675 -
Pte4g01008 266 Pfam Leucine rich repeat 160 202 IPR001611 GO:0005515
Pte4g01008 266 Pfam Leucine rich repeat 97 154 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g01008 Pte-Chr4 41237422 41240606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g01008 2 244 Strubbelig Receptor Gene Family AT1G53730 59.426 3.75e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g01008 - - qsa:O6P43_027468 371.318