Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00990 ATGGAGAGAAGAACGGTCGCTATGCTCAACGTGCTGGATCTGGCTCTCCGATTTATCTCTCTGCTGTTCTTGAATTCATCACTATTGAGGTTTATGGTTCTTTATTCCATTCTCTATGTTGGTTGGAAAGGTAAATCTCGTTGGACCGTACGCCGAAGGAGACTCCATTCGAGCAGACAGCGCAGCGCCACTGAAAGAGATCCTTTCTCTATCAACAACACCACAGAGATGGAAGCTCAGAATCTACAACAGACCCAGGTTTTTGAATTTAATGCCAATATTCCTGGTGGGGTAGGCTATGTCAGAGGGAGTAAGACATGCGGAGATGCACCTTGTGGTTTTGCTGATGCTGGATACGTATCAAAGGATGCCAAAGAACGATCAAGGGCAATTCAAAAGCTTCTAATAGCCGTATTACTTTGTGTTATTTTCATGGCTGTCGAAATTGTTGGAGGTGTAAAAGCCAATAGTCTTGCAATATTAACTGATGCAGCACACCTCCTTTCCGATGTTGCCTCTTTTGCAATCTCTTTGTTCTCCTTATGGGCTGCAGGTTGGGAAGCTACTCCTCGTCAGTCATATGGTTTTTTCAGAATAGAGATTCTTGGTGCTCTTGTTTCAATCCAACTTATTTGGTTGCTTGCTGGGATTCTAGTATACGAAGCCATTGTTAGACTCATCTATGATACTGGTGAGGTGAATGGCTTCCTAATGTTCGCAGTTTCTGCATTTGGCCTTGTGGTTAATATCATCATGGCTTTATTACTTGGACACGGACATGATCATGGGCACGGACACGATCATGGACACGGACATGATCATGGACATGGCAATGGGGTTACTGTCTCTCATCATCATCACCAACATGATGTGGAGCAAGGAAACGACGGGCACAGTGGCAGTCATGAAGATCACAAGCATGATCATACTCATGATGTAAATCAACCTTTACTAGATGGCAACAAAGGTGGACATAAAGAGAAGCGTCAAAATATTAATGTTCAGGGAGCTTATCTCCATGTTCTTGGAGATTCCATTCAAAGTGTTGGGGTTATGATTGGTGGGGCAATCATATGGTTCAAGCCAGATTGGAGGATAGTTGATTTGATTTGCACGTTAATTTTTTCAGTTATTGTTCTGGGGACTACCATCAACATGCTTCGCAACATACTTGAAGTCTTGATGGAAAGTACACCTAGAGAGATTGATGCAAGGAAGCTCCAAAATGGTCTGTTACAGATGGATGAAGTGACTGCTGTTCATGAATTGCATATATGGGCAATCACGGTCGGGAAGATCTTATTAGCCTGTCATGTGAAAATCATGCCTGAAGCAAATGCAGACATGGTACTGGAGAAGGTAATAGACTATATCAGAAGGGAATATAATATCAGCCATGTAACCATTCAAATAGAGCGTTAA 1422 0.4262 MERRTVAMLNVLDLALRFISLLFLNSSLLRFMVLYSILYVGWKGKSRWTVRRRRLHSSRQRSATERDPFSINNTTEMEAQNLQQTQVFEFNANIPGGVGYVRGSKTCGDAPCGFADAGYVSKDAKERSRAIQKLLIAVLLCVIFMAVEIVGGVKANSLAILTDAAHLLSDVASFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIVRLIYDTGEVNGFLMFAVSAFGLVVNIIMALLLGHGHDHGHGHDHGHGHDHGHGNGVTVSHHHHQHDVEQGNDGHSGSHEDHKHDHTHDVNQPLLDGNKGGHKEKRQNINVQGAYLHVLGDSIQSVGVMIGGAIIWFKPDWRIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDARKLQNGLLQMDEVTAVHELHIWAITVGKILLACHVKIMPEANADMVLEKVIDYIRREYNISHVTIQIER* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00990 473 SUPERFAMILY Cation efflux protein transmembrane domain-like 128 396 IPR027469 -
Pte4g00990 473 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 103 473 - -
Pte4g00990 473 NCBIfam cation diffusion facilitator family transporter 132 473 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte4g00990 473 Pfam Cation efflux family 134 395 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte4g00990 473 MobiDBLite consensus disorder prediction 263 326 - -
Pte4g00990 473 Gene3D Cation efflux protein transmembrane domain 131 394 IPR027469 -
Pte4g00990 473 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 401 472 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00990 Pte-Chr4 41065278 41072264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00990 77 474 Inorganic Solute Cotransporters AT2G46800 70.149 1.60e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00990 K14689 - fve:101295162 568.155