Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00981 ATGGGGAAGAAGGGAGGTAGCTCATGGTTGACTGCTGTGAAAAGGGCATTCAGATCTCCAACCAAAGACAGTGACAAAAAAAATAGCAGAAGAAGAGTAGACCGTGATCAAGAAGAAGACGAAGAAAAGAAAAGAGAAAAACGAAGATGGATTTTTCGGAAACCACCAAACCAAGAACCAAGCACTCTACAAGCAACAACGCCAAAGGACAAGCCTGATTTGGCTACAAGTCGCTCTGCAACAGCAGAACTTGCATCATCATTAGCAACAGTTGCTACATCTGCTGCTGAACAACAACATGCTCTAGCAGTGGCAGTAGCCACTGCGGAAGCTGCAATGGCTACTGCTCAAGCTGCTGTAGAGGTTGCCAGGTTGACGAGACCTTGTAATCGTGCCAAAGAGCAACATGCTTCCATTGTTATTCAAACTGCTTTCAGAGGATATCTGGCTAGGAGAGCACTTCGCGCGCTTAAGGGGCTGGTAAAGTTGCAAGCTTTAGTGAGAGGCCATAACGTTAGAAAGCAAGCCAAGATGACCCTTCGTTGCATGCAAGCTATGGTTCGAGTACAAGCTAGAGTGCTGGACCAACGCGTGAGATTGTCACATGATGGCAGCAGAAAATCGACGTTTAGTGAGACAACTAGCATGTGGGATTCGCGGTACCTTCAGGATATTTCAGAGAGAAAATCAATTTCAAGAGAAGGAAGCAGCATTGCAGACGACTGGGATGAACGACCCCATACAGTTGAAGAAGTTAAAGCGATGCTGCGGCAGAGAAAGGAAGCTGCAAGGAAGCGTGATAAATATCTCTCTCAAGCTTTTTCTCAACAGATATGGAAGAATGGTAGAAGCACATCAATAGGAAATGAAGATGAGCTGGAAGAAAGACCCAAATGGCTTGAAAGGTGGATGGCAACAAAGCCATGGGAAACCAGGGAAAGAACTTCAACTGATCAGAGAGAATCTATTAAGACAGTTGAAATCGATACATCTCAACCTTACTCTTATCTAGCACCACCTAACTTGAGAAGATCACATCCAAATTACCAATACCATCTTCAATATCATAAACACAGGCCAAGTACACACTCAGCAGCTTCACCACTCGATAGAGCCCACCAAAATGGATTTGCATATCAATCTACTATAACCCCTTCTCCTGCAAAGTCAAGGTCTATCCAAGTCCGGTCTGCAAGTCCTCGTTTTAGTAGAGAAGATACAAGCTACCAACGATCACAAACACCAAGCTTAAGGTCTAATTATCACTATAATGGTAATCTGCACCAGAATGTTAGGATCAGCAGTGCCGGGGGCACTGCTACATTGCCCAATTACATGACAACAACAGAGTCAGCTAAGGCTAGAATACGCTCTCAGAGTGCTCCTAGGCAAAGACCCTTAACCCCAGAGAGAGAGAGAGTTGGATCAGCAAAAAAAAGGCTTTCATTCCCAGTTCCTGACCCTTTTTATGTTGGAGCAGGATATGAAAGTTATGGCAATAGTTTAAGGAGTCCAAGTTTTAAGAGTGTATGTGGCTCACACTTTGGACTGGAACGACAATCAAACTATTCTTCCTGCTGCACTGAAAGTCTTGGAGACGAGACTTCCCTTTCTTCCACTGGTGACCTTAGAAGATGGTTGAGATGA 1647 0.4451 MGKKGGSSWLTAVKRAFRSPTKDSDKKNSRRRVDRDQEEDEEKKREKRRWIFRKPPNQEPSTLQATTPKDKPDLATSRSATAELASSLATVATSAAEQQHALAVAVATAEAAMATAQAAVEVARLTRPCNRAKEQHASIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQAMVRVQARVLDQRVRLSHDGSRKSTFSETTSMWDSRYLQDISERKSISREGSSIADDWDERPHTVEEVKAMLRQRKEAARKRDKYLSQAFSQQIWKNGRSTSIGNEDELEERPKWLERWMATKPWETRERTSTDQRESIKTVEIDTSQPYSYLAPPNLRRSHPNYQYHLQYHKHRPSTHSAASPLDRAHQNGFAYQSTITPSPAKSRSIQVRSASPRFSREDTSYQRSQTPSLRSNYHYNGNLHQNVRISSAGGTATLPNYMTTTESAKARIRSQSAPRQRPLTPERERVGSAKKRLSFPVPDPFYVGAGYESYGNSLRSPSFKSVCGSHFGLERQSNYSSCCTESLGDETSLSSTGDLRRWLR* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00981 548 MobiDBLite consensus disorder prediction 57 78 - -
Pte4g00981 548 MobiDBLite consensus disorder prediction 451 465 - -
Pte4g00981 548 MobiDBLite consensus disorder prediction 18 54 - -
Pte4g00981 548 Pfam IQ calmodulin-binding motif 136 155 IPR000048 GO:0005515
Pte4g00981 548 Pfam IQ calmodulin-binding motif 161 177 IPR000048 GO:0005515
Pte4g00981 548 Pfam Protein of unknown function (DUF4005) 399 495 IPR025064 -
Pte4g00981 548 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Pte4g00981 548 MobiDBLite consensus disorder prediction 310 325 - -
Pte4g00981 548 MobiDBLite consensus disorder prediction 1 78 - -
Pte4g00981 548 MobiDBLite consensus disorder prediction 381 420 - -
Pte4g00981 548 SMART iq_5 156 177 IPR000048 GO:0005515
Pte4g00981 548 SMART iq_5 133 155 IPR000048 GO:0005515
Pte4g00981 548 PANTHER IQ-DOMAIN 5-RELATED 1 484 - -
Pte4g00981 548 MobiDBLite consensus disorder prediction 451 476 - -
Pte4g00981 548 FunFam IQ-domain 11 133 184 - -
Pte4g00981 548 ProSiteProfiles IQ motif profile. 158 185 IPR000048 GO:0005515
Pte4g00981 548 MobiDBLite consensus disorder prediction 529 548 - -
Pte4g00981 548 MobiDBLite consensus disorder prediction 310 346 - -
Pte4g00981 548 Gene3D - 132 187 - -
Pte4g00981 548 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00981 Pte-Chr4 40999611 41002277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00981 9 549 IQD Protein Family AT4G00820 56.600 1.42e-173 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00981 - - qsa:O6P43_018534 736.102