Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00974 ATGGGACAGTGTTATGGTAAAACCAATTCTACTGATGACAATGGTGGAATACACACTGCAATGGGTCGTCCACAGACGCCATCTTATTCTGTGTACACTTCTGATACCAACGACGTCAATGGCTTCCAGTCGGTTAAAAGCACTCCGGCTAGGTCTTCACACCCGAGTCCATGGCCTAGTCCCTATCCGCATGGACTAAACGCAAGCCCTTTACCTGCAGGAGTGTCTCCTTCACCGGCGAGAGCATCTACACCAAGGAGATTCTTCCGGAGGCCATTTCCGCCGCCCTCTCCGGCGAAACATATAAGAGCTTCCTTAGCGAAAAGGCTGGGTCATGGGAAGAAGAACGACGGTCCCATCCCAGAGGATCGTGGCCAGCAGCCAGAGGAAGCTCTGGACAAGAGCTTTGGCTATAGCAAGAATTTTGGAGCTATGTATGAGTTGGGGAAGGAAGTGGGTCGAGGGCATTTTGGACATACGTGTTCTGCTAGGGGTAAAAAGGGCGAGCTCAAAGATCATCCTCTTGCTGTTAAGATTATTTCTAAGGCGAAGATGACAACTGCAATTGCAATTGAAGATGTTCGTAGAGAGGTGAAGATATTAAAAGCTCTCTCTGGACATAGGCATCTGGTTAAGTTTTATGATGCTTGTGAGGATGCCAATAATGTGTACATAATAATGGAGTTATGTGAAGGTGGGGAGCTCCTCGACAGGATATTGTCAAGAGGGGGAAGATATGCAGAGGCAGATGCTAAGATCATCGTCTTGCAAATTTTAGGTGTAGTTGCCTTCTGTCATCTTCAAGGGGTGGTTCACCGTGACCTTAAGCCAGAGAATTTCCTTTTTACTTCAAGAAGTGAAGATTATGACATGAAACTTATTGACTTTGGCTTATCTGACTTTGTTCGACCAGATGAAAGACTTAATGATATCGTTGGAAGTGCATATTACGTTGCACCAGAAGTTCTCCATAGGTCCTATAGTCTGGAAGCTGATATATGGAGTATTGGTGTTATCACCTATATCTTGTTATGTGGGAGCCGACCTTTTTGGGCACGGACAGAGTCTGGAATTTTTCGTTCAGTGCTAAGAGCTGATCTTAACTTCAATGATATGACCTGGCAATCAGTGTCTCCAGAAGCTAAAGACTTTGTGAGACGGCTTCTGAACAAGGACTACAGAAAACGAATGACTGCTGTCCAAGCTGTCATGCACCCATGGTTATGGAAAGATAATCACCCTATCCCTCTGGATATATTGATTTACAAATTAGTGAAATCATACCTGTATGCAAGTCCATTCAGACGTGCAGCATTGAAGGCTCTTTCAAAAGCGTTAACAGAGAATGAGGTGGTATATCTTAGAGCTCAATTTAGGTTGCTAGAACCAAATAGAGACGGGCACATCTCTCTGGAAAATTTCAAAATGGCTCTAGTCCGCAATGCAAGTGATGCAATGAGAGACTCAAGGGTTCTTGATATTATACATGCGATGGAACAACTTGCCCACAGAACTATGGACTTTGAAGAATTCTGTGCTGCTGCTATTAGCCCGCATCAACTCGAGGCTCTTGATGGGTGGCAGCAGATTGTCTCTTGTGCTTTTGAACATTTTGAGAGGGAGAGTAACCGTGTCATATCTGTCCAAGAATTAGCAAGGGAACTGAATATTGGTCCTTCAGCCTATTCTATTCTTAAAGATTGGATAAGGAACGCTGATGGAAAACTTAGTTTACATGGATACACAAACTTTTTGCATGGTGTAACACTTCGTAGCTCAAACTCAAGACATCGTTAA 1797 0.4407 MGQCYGKTNSTDDNGGIHTAMGRPQTPSYSVYTSDTNDVNGFQSVKSTPARSSHPSPWPSPYPHGLNASPLPAGVSPSPARASTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKKNDGPIPEDRGQQPEEALDKSFGYSKNFGAMYELGKEVGRGHFGHTCSARGKKGELKDHPLAVKIISKAKMTTAIAIEDVRREVKILKALSGHRHLVKFYDACEDANNVYIIMELCEGGELLDRILSRGGRYAEADAKIIVLQILGVVAFCHLQGVVHRDLKPENFLFTSRSEDYDMKLIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADLNFNDMTWQSVSPEAKDFVRRLLNKDYRKRMTAVQAVMHPWLWKDNHPIPLDILIYKLVKSYLYASPFRRAALKALSKALTENEVVYLRAQFRLLEPNRDGHISLENFKMALVRNASDAMRDSRVLDIIHAMEQLAHRTMDFEEFCAAAISPHQLEALDGWQQIVSCAFEHFERESNRVISVQELARELNIGPSAYSILKDWIRNADGKLSLHGYTNFLHGVTLRSSNSRHR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00974 598 Gene3D Transferase(Phosphotransferase) domain 1 236 423 - -
Pte4g00974 598 MobiDBLite consensus disorder prediction 1 133 - -
Pte4g00974 598 ProSiteProfiles Protein kinase domain profile. 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00974 598 MobiDBLite consensus disorder prediction 1 53 - -
Pte4g00974 598 Gene3D - 426 581 - -
Pte4g00974 598 SMART serkin_6 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00974 598 PANTHER SERINE/THREONINE-PROTEIN KINASE 130 573 - -
Pte4g00974 598 Gene3D Phosphorylase Kinase; domain 1 139 235 - -
Pte4g00974 598 Pfam Protein kinase domain 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00974 598 FunFam Calcium-dependent protein kinase SK5 318 413 - -
Pte4g00974 598 ProSitePatterns Protein kinases ATP-binding region signature. 152 178 IPR017441 GO:0005524
Pte4g00974 598 MobiDBLite consensus disorder prediction 110 130 - -
Pte4g00974 598 Gene3D - 447 516 - -
Pte4g00974 598 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Pte4g00974 598 FunFam CDPK-related kinase 3 138 310 - -
Pte4g00974 598 FunFam CDPK-related kinase 1 139 234 - -
Pte4g00974 598 SUPERFAMILY Protein kinase-like (PK-like) 146 431 IPR011009 -
Pte4g00974 598 SUPERFAMILY EF-hand 434 587 IPR011992 -
Pte4g00974 598 CDD STKc_CAMK 146 407 - -
Pte4g00974 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Pte4g00974 598 FunFam CDPK-related kinase 1 444 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00974 Pte-Chr4 40884834 40890930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00974 1 592 EF-hand Containing Proteins AT3G50530 57.098 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte4g00974 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00974 K13412 - qsa:O6P43_027422 991.875