Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00970 ATGACCACCGACATAGATACTCTCTGGGTGTTTGCCCTCGTCTCCAAATGCAGAGCTTTCACCCAAGAAAACATTGCATGCTCTCTTGTCATCATTGCCATACTCTGGCTAACCATGACTCTCTTGTACTGGTCTCACCCTGGTGGTCCAGCTTGGGGCAAGTACTTCTACTTCTATCACTGCTACTATACCTGGAGAAAGGGTCCAAATTTAACCTCAGCTAAACCTAGTAGTCGTACTAGTCCTACCTCTGATCATATTACTAGTGCTGCTTTGTCAAAAGCTATCATTCCAGGTCCCAAAGGGTTGCCTGTATTTGGAAGTATCAACTTGATGATCTCACTTGCTCATCGTCGTATAGCAGAAGCAGCTGAGGCATGCAAAGCCAAAAGACTGATGGCCTTCAGTCTGGGTGAAACCCGCGTGATTGTCACGTGCCACCCTGACGTTGCAAAGGAAATTCTCAATAGTTCTGTGTTTGCCGATCGTCCAGTGAAGGAGTCCGCTTACAGTTTGATGTTCAACAGAGCAATTGGTTTCGCTCCTTATGGGGTTTACTGGAGAACCCTTCGCAGAATCGCAGCGACTCATCTCTTTTGTCCTAAGCAAATCAAAGCCTCTGAGTTTCAGAGATCTGAAATCGCTGCGGAAATGATCGACATGTTTAGAAACCGTGGCGAAAGTCTGCGAGTTCGTGAAGTGCTCAAAGCAGCTTCGCTGAACAACATGATGTGCTCTGTGTTTGGACGACGGTATAAGCTAGACTCAACCAATAATGAAATACAAGAGTTACGAGGACTCGTTGATGAAGGTTACGATTTATTGGGTACCTTAAATTTAAGTGACCACCTGGCATGGCTCTCAGATATTGATCTTCAAAAAATCCGGTTCAGATGTTCTAAACTCGTTCCCAAAGTGAACCGGTTCGTCAGCCGGATCATAGACGAACACAAAACCACAACGACGTCGTCAGTCAACCTGGATTTCGTTGACGTTTTGCTCTCCCTTCAGGGACCTGATAAAATATCTAACTCCGACATGATCGCCGTTCTCTGGGAAATGATATTTAGAGGGACTGATACAGTGGCGGTTCTGATCGAGTGGATACTAGCAAGGATTGTGCTTCATTCTGATGTGCAATCAACGGTCCATGATGAACTTGATCGGGTGGTCGGAGCAACAAGAATCGTCAATGAGTCTGATGTCGGTTCCATGGTGTATCTAACGGCAGTGGTGAAGGAAGTGTTAAGACTACATCCACCCGGCCCACTTCTGTCCTGGGCTCGATTGGCTATCACTGATACGATACTGGATGGGTATCACGTGCCAGCCGGGACAACAGCAATGGTGAACATGTGGGCCATATCCAGGGACCCAGATATGTGGGGGGACCCAATGGAATTTATGCCGGAGAGATTTGTGAGTAAGGAAGGAGAGGCGGAGTTCTCTGTTCTCGGATCAGATCTAAGGCTTGCTCCATTCGGATCGGGTAGGCGGATTTGCCCTGGTAAGGCGTTGGGCTTAGCTACGGTGACGTATTGGGTAGCTTCGCTTTTGCATGAGTTTGACTGGTTACCTTGTGGTGAGAAAAACGTTGACCTATCTGAGGTCTTAAAATTGTCGTGTGAAATGGCCACTCCTTTAATGGCTAAATTGCGCCCTAGGCGCAATATAACCCTGTAA 1683 0.4712 MTTDIDTLWVFALVSKCRAFTQENIACSLVIIAILWLTMTLLYWSHPGGPAWGKYFYFYHCYYTWRKGPNLTSAKPSSRTSPTSDHITSAALSKAIIPGPKGLPVFGSINLMISLAHRRIAEAAEACKAKRLMAFSLGETRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEFQRSEIAAEMIDMFRNRGESLRVREVLKAASLNNMMCSVFGRRYKLDSTNNEIQELRGLVDEGYDLLGTLNLSDHLAWLSDIDLQKIRFRCSKLVPKVNRFVSRIIDEHKTTTTSSVNLDFVDVLLSLQGPDKISNSDMIAVLWEMIFRGTDTVAVLIEWILARIVLHSDVQSTVHDELDRVVGATRIVNESDVGSMVYLTAVVKEVLRLHPPGPLLSWARLAITDTILDGYHVPAGTTAMVNMWAISRDPDMWGDPMEFMPERFVSKEGEAEFSVLGSDLRLAPFGSGRRICPGKALGLATVTYWVASLLHEFDWLPCGEKNVDLSEVLKLSCEMATPLMAKLRPRRNITL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00970 560 SUPERFAMILY Cytochrome P450 97 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 FunFam Cytochrome P450 78A5 89 555 - -
Pte4g00970 560 CDD CYP78 131 548 - -
Pte4g00970 560 PANTHER CYTOCHROME P450 78A7-RELATED 1 556 - -
Pte4g00970 560 Pfam Cytochrome P450 98 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 409 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 501 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 491 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 238 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS E-class P450 group I signature 451 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS P450 superfamily signature 501 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 PRINTS P450 superfamily signature 492 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00970 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 494 503 IPR017972 GO:0005506|GO:0016705
Pte4g00970 560 Gene3D Cytochrome P450 90 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00970 Pte-Chr4 40813382 40815555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00970 1 557 Cytochrome P450 AT2G46660 64.643 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00970 K20619 - qsa:O6P43_018550 842.032