Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00945 ATGGCCTCTGCTGAGAAAATTGACCAAGATCATGATCAGCAGCTGTTCCCAACGGATGAAGACTGCTCTTATGCCATGCAGATAGCCAGTTCTTCCATCTTTCCCATGGTGATGAAAGCAGCAATAGAGCTGGGACTACTAGACATTATTTTCAGAGCTGGTGTGGGTGCATGTCTTTCTGCAGAGGAGATTGCTTCTCAGTTGAACACCACAAATTCACATGCACCAGAAAGGGTGGACCGGATTTTGCGCCTTCTAGCCAGCTACTCTTTGGTTTCTTGCACTCTCACAGATAAACACAACGGCAGCAGCTGCAGTGGTAACCATCAAAGGGTGTACGGCTTGAAACCTGCTGCAAAGTTTTTCCTCCATGATCAAGAAGAATTGACTTTTTCACACAGCATGCTAATGTTTCTTGACAAGGTTTTCATGGATAGTTGGTATGTTTTGAAAGATGCAGTTCTGGAAGGTGGAATCCCATTTAATAAGGTCCATGGAATGGGTGTCTATGAGTATCTTTCTATAGACCTCAGATTCAGTCAAGTTTTCAACAAAGCAATGATCAGTCATACAACAATAGTCATGAACTCCATCCTTGAGAAATACCAAGGATTCAAGGGGATCAAAGAGTTGGTTGATGTTGGTGGCGGGCTGGGGCTCACTCTCAAAACGATCATATCCCAATATCCCAGTATCAATGGTATCAATTTTGACTTACCTCATGTTATACAGGATGCCCCACCTTCTTCAGGGATAATGCATGTTCCTGGTGACATGTTTGCTGGTGTTCCTAAAGGAGAATCCATCTTGTTGAAGTGTATACTTCATAATTGGGATGATGATGACTGTGTGAAGATTCTTAAGAATTGTTATGAAGCACTTCCTGAGGAAGGGAACTTAATTGTGATAGAGACTGTCATTGCTGAAGTACCTGAGACAAGTGCAGCTTCAAGGTGCAGTTTTCAGATGGACTTGCAAATGATGACGCAACATATTGGTGGGAAAGAGCGTACTAAGGATGAATATGAGTCCCTAGCCCTGAATGCTGGATTCAAAAGTGTTAGATTTGATTGCTTGGCATGCAATTATTGTGTTATGGAGTTCTGTAAATAA 1113 0.4241 MASAEKIDQDHDQQLFPTDEDCSYAMQIASSSIFPMVMKAAIELGLLDIIFRAGVGACLSAEEIASQLNTTNSHAPERVDRILRLLASYSLVSCTLTDKHNGSSCSGNHQRVYGLKPAAKFFLHDQEELTFSHSMLMFLDKVFMDSWYVLKDAVLEGGIPFNKVHGMGVYEYLSIDLRFSQVFNKAMISHTTIVMNSILEKYQGFKGIKELVDVGGGLGLTLKTIISQYPSINGINFDLPHVIQDAPPSSGIMHVPGDMFAGVPKGESILLKCILHNWDDDDCVKILKNCYEALPEEGNLIVIETVIAEVPETSAASRCSFQMDLQMMTQHIGGKERTKDEYESLALNAGFKSVRFDCLACNYCVMEFCK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00945 370 SUPERFAMILY "Winged helix" DNA-binding domain 19 125 IPR036390 -
Pte4g00945 370 Gene3D - 2 122 IPR036388 -
Pte4g00945 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 368 IPR029063 -
Pte4g00945 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 370 IPR016461 GO:0008168
Pte4g00945 370 PIRSF O-mtase 1 370 IPR016461 GO:0008168
Pte4g00945 370 FunFam Caffeic acid 3-O-methyltransferase 4 122 - -
Pte4g00945 370 PANTHER O-METHYLTRANSFERASE 25 356 IPR016461 GO:0008168
Pte4g00945 370 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Pte4g00945 370 Gene3D Vaccinia Virus protein VP39 123 370 IPR029063 -
Pte4g00945 370 FunFam Caffeic acid O-methyltransferase 123 370 - -
Pte4g00945 370 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00945 Pte-Chr4 40568203 40571101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00945 12 370 Monolignol Biosynthesis Gene Families AT5G54160 48.485 2.08e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00945 K13066 - qsa:O6P43_027184 415.616