Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00942 ATGATGAGCACAGTTGAAGGGAAAGAGATTATAGTCTTTCTGGACTATGATGGAACACTCTCACCAATTGTAGATGATCCTGAACAAGCTTTCATGAGTGATGAGATGCGCTCAGCTGTTCATGAAGTAGCTCATTACTTCACTACTGCAATTGTTAGTGGAAGGCGCCGGGACAAAGTATACGAATTTGTACAATTGGAAAATGTGTTCTACGCCGGCAGCCATGGCATGGACATATCAACCCCATCTGGCTCCATTAAGTATGGAGATAAATCCAAGCAAACCATATCTATTGACAAGAAGGGTAATGCAGCCATTCATTTTCATCCAGCTCAAGAATTTTTGCCAAAAATTCAGGAGATGTTCAAGGTACTGCAGGAAAACACGAAGAATATAAAAGGCTCGATGGTTGAAGACAACAAGTTCTGTGTCTCTGTACACTATCGACGTGTTAAAAGTGAAGAGGCAAGTGTCTGGTCTGAACGGGTGGAGTCTGTTATGAAAGCTTACCCTGAATTTCACATATCCAAAGGGAAGAAGGTAATGGAGATAAGGCCAAGCATTGACTGGGATAAAGGTCGAGCTTTGCAATATTTACTTGACACTCTTGGATTTGATAGCTTGAGTGATGTTGTTCCTATATATATAGGAGATGACAAAACTGATGAAGATGCTTTTAAGGTTATAAGGCACATTGGACAAGGGTTTCCTGTTGTTGTTTCTTCGATTGTAAAAGAGACCAGGGCTTCATATTCATTGCGGGACCCTGCCGATGTGATGACATTTTTGAAACGTTTAGCAAAGTGGAAGAAAAGCAGCTCATGGTAG 828 0.4118 MMSTVEGKEIIVFLDYDGTLSPIVDDPEQAFMSDEMRSAVHEVAHYFTTAIVSGRRRDKVYEFVQLENVFYAGSHGMDISTPSGSIKYGDKSKQTISIDKKGNAAIHFHPAQEFLPKIQEMFKVLQENTKNIKGSMVEDNKFCVSVHYRRVKSEEASVWSERVESVMKAYPEFHISKGKKVMEIRPSIDWDKGRALQYLLDTLGFDSLSDVVPIYIGDDKTDEDAFKVIRHIGQGFPVVVSSIVKETRASYSLRDPADVMTFLKRLAKWKKSSSW* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00942 275 Pfam Trehalose-phosphatase 13 256 IPR003337 GO:0003824|GO:0005992
Pte4g00942 275 Gene3D - 12 253 IPR023214 -
Pte4g00942 275 FunFam Trehalose 6-phosphate phosphatase 111 187 - -
Pte4g00942 275 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 274 IPR044651 GO:0004805|GO:0005992
Pte4g00942 275 FunFam Trehalose 6-phosphate phosphatase 117 275 - -
Pte4g00942 275 Gene3D - 92 187 - -
Pte4g00942 275 SUPERFAMILY HAD-like 11 270 IPR036412 -
Pte4g00942 275 NCBIfam HAD-IIB family hydrolase 11 233 IPR006379 -
Pte4g00942 275 CDD HAD_TPP 12 260 - -
Pte4g00942 275 NCBIfam trehalose-phosphatase 107 268 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00942 Pte-Chr4 40534174 40535863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00942 12 267 Trehalose Biosynthesis Gene Families AT1G70290 25.547 4.61e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00942 K01087 - qsa:O6P43_017762 416.001