Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00926 ATGGTTGAGACTAAGTACACTGAACGGCGAATTATAATCAACAAATTCATCAAGGCAAAAACTTTGATGGGGTTGTCAGATGAGAGGAAACCACAGCGGAAGGTTGTTCGGATTACTTACTCTGATCACAATGCTACTGACTCGTCCAGTGATGAAGAAGAGATAGATAGAAGCAGAGGTGTATTCAAAAAGACCCGAGTGAAGAGGATCGTGAATGAGGTGAGGATTGTCGAGTGTGAAGATTCTGCCGTAAGAAAATTGAATTCTAGAGCTTCCTCCAGGAGTAAAAAGAAGCAAAATGGAGATTTCGTGAAAAGGAAAGATGGTACTGGTAAGAATTTTAAAGGGGTGAGGCAGAGACAATGGGGAAGATGGGCTGCAGAGATTAGAAATCCTTTCAGTAAAGGTAGGCTTTGGCTTGGTACGTATGATACTGCAGAAGAGGCTGCTATGGCTTATGACAAGAAATCTATTGAACTAAGAGGACCTGCTGCTTTCACAAATCTCATCAAACCAGTTCTAGAACCTCAGAAACCTTTGTCTCCTTCTCCATTTCCACCGCCTGAAGTTGACATTGGCACGGCTTGTAGTGGATTGGATGAATTTGTACAGATAAATAATGAGCCATCTAAACTTGATTCGGGTGTGAATTTTGAATACGACTCTGGGTTTGAATCACAAGCTTTGCATTCACCTACATCTGTTCTTAGATATCAACCCCTTGAACTTGGGGTTGAGCCAGTAGATACCCACGAGTGGAGACCTATTGAAGATATCAGAGAAGAGGATGGGTTTGTGTGGGAAGATCAACCACAATTTTTCCGTGGTTGGCTTGATATTGATTCTGTGACTCCTTTGCCGACATTCTATGATGAAATTCGTGGACCTAGTGAAAATTTCAGTGATATTTCACTTGATTCACATCAAGATTTCAGGTCTTGTACATGGGATGTTGACCAGTATTTTCAAGACCAACCTTTGACACTGCAGTGA 993 0.4169 MVETKYTERRIIINKFIKAKTLMGLSDERKPQRKVVRITYSDHNATDSSSDEEEIDRSRGVFKKTRVKRIVNEVRIVECEDSAVRKLNSRASSRSKKKQNGDFVKRKDGTGKNFKGVRQRQWGRWAAEIRNPFSKGRLWLGTYDTAEEAAMAYDKKSIELRGPAAFTNLIKPVLEPQKPLSPSPFPPPEVDIGTACSGLDEFVQINNEPSKLDSGVNFEYDSGFESQALHSPTSVLRYQPLELGVEPVDTHEWRPIEDIREEDGFVWEDQPQFFRGWLDIDSVTPLPTFYDEIRGPSENFSDISLDSHQDFRSCTWDVDQYFQDQPLTLQ* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00926 330 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Pte4g00926 330 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Pte4g00926 330 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Pte4g00926 330 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Pte4g00926 330 MobiDBLite consensus disorder prediction 95 114 - -
Pte4g00926 330 FunFam Ethylene-responsive transcription factor 2 112 171 - -
Pte4g00926 330 Gene3D AP2/ERF domain 112 170 IPR036955 GO:0003700|GO:0006355
Pte4g00926 330 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 242 - -
Pte4g00926 330 CDD AP2 112 168 IPR001471 GO:0003700|GO:0006355
Pte4g00926 330 SMART rav1_2 113 178 IPR001471 GO:0003700|GO:0006355
Pte4g00926 330 MobiDBLite consensus disorder prediction 87 115 - -
Pte4g00926 330 SUPERFAMILY DNA-binding domain 114 169 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00926 Pte-Chr4 40401874 40402866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00926 4 250 AP2-EREBP Transcription Factor Family AT4G27950 37.052 2.01e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte4g00926 AP2 4.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00926 - - qsa:O6P43_017734 222.631