Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00920 ATGGGGAACAGTGAGGAGGCGAAATCATCTAAACCTGAAAAACTTTATTCACCCAACGCTACTGATCAAGCTAATCGCAGCACCCAGACAAATATTCATGTGTATCCTGATTGGGGAACAATGCAGGCATATTATGGACCAAGAGTTACCTTGCCACCATATTATAATTCAGCCATTGCTTCTGGACATACTCCTCATCCATACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGGGCACCATATGCTGCGATATATTCACATGGAGGCGTGTATGCACATCCCACAGCCCCTCTTGGACCTCATCCTCTAGGCCAAGGATATCCATCTTCCCCAGCTGTTGCTGCTCCTCATAGTATGGAAACTCCTACAAAGTCATCTGGAAATACAGATCAGGGACTAGTAAAGAAGTTGAAAGGTTTCGATGCCCTTGTAATGACAATAGGCAATGGTAATGTTGAGAATGAGAGTGGTGCTGAACATAGAGTGCCACAGAGTTTTGATACCGAAGCTTCTAGTGATGGAAGTGATGGTCACACATCCGAGGCTAATAGACCAAGAAGGAAAAGAAGCCGTGAGACAACACCAAGCACTGATGGAAAGGCTGAAACATATACCAGTTCAGTTTCTGAAAAGGAGGGGGCAATTCCTGCAAAGGCAATGAAAGTTGCTGCTGTTCCTGGAAGACCTGTTCTTTCTCCTGGCATGACCACAGCACTGGAGCTGCAAAATACTTCTACTGTTCTTGCAAAAACAAATCCCTCACGTGTTGGCCAATCTTGTGCCATAGTGCCTCCTGATGCTCGGTTACAGAATGAAAGGTTGCTGAAACGAGAGAGGAGGAAACAATCAAATAGAGAATCTGCCAGAAGGTCTCGGCTACGAAAGCAGGTATCAATGGGTACATAA 915 0.4579 MGNSEEAKSSKPEKLYSPNATDQANRSTQTNIHVYPDWGTMQAYYGPRVTLPPYYNSAIASGHTPHPYMWGPPQPMMPPYGAPYAAIYSHGGVYAHPTAPLGPHPLGQGYPSSPAVAAPHSMETPTKSSGNTDQGLVKKLKGFDALVMTIGNGNVENESGAEHRVPQSFDTEASSDGSDGHTSEANRPRRKRSRETTPSTDGKAETYTSSVSEKEGAIPAKAMKVAAVPGRPVLSPGMTTALELQNTSTVLAKTNPSRVGQSCAIVPPDARLQNERLLKRERRKQSNRESARRSRLRKQVSMGT* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00920 304 Pfam bZIP transcription factor 275 301 IPR004827 GO:0003700|GO:0006355
Pte4g00920 304 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 282 297 IPR004827 GO:0003700|GO:0006355
Pte4g00920 304 MobiDBLite consensus disorder prediction 1 29 - -
Pte4g00920 304 MobiDBLite consensus disorder prediction 182 199 - -
Pte4g00920 304 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Pte4g00920 304 MobiDBLite consensus disorder prediction 154 220 - -
Pte4g00920 304 MobiDBLite consensus disorder prediction 274 296 - -
Pte4g00920 304 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 300 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pte4g00920 304 Pfam Disordered region downstream of MFMR 133 256 - -
Pte4g00920 304 MobiDBLite consensus disorder prediction 274 304 - -
Pte4g00920 304 CDD bZIP_plant_GBF1 280 299 IPR045314 GO:0003700|GO:0006355
Pte4g00920 304 MobiDBLite consensus disorder prediction 104 135 - -
Pte4g00920 304 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00920 Pte-Chr4 40357567 40361293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00920 29 300 bZIP Transcription Factor Family AT2G46270 51.825 3.55e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte4g00920 MFMR_assoc 5.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00920 K09060 - gmx:100781875 354.755