Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00916 ATGCCACCGCCATTACTGTCACTCTCGTGCCCTCTTCTCTGCTTCTTCTTTCTCTGCACACTGCCCTCCACAACTCTCTCTCTCAACCAAGAAGGCCTCTACCTTCTCCAATTCAAACTTTCTCTTGATGACCCCTCTTCCTCACTTTCATCATGGAATGAACGTAATGACACGCCCTGTAAATGGTTTGGTGTTCAGTGTGATAACACTACTCACTCTGTGACTTCCATTGATCTCTCTAGTGCAAACGTTGCTGGCCCTCTTGACCCTTATCTTATATGCAGCTTAACCAAGCTCACGTCTCTTACCCTCTTCAACAACTCTATTAACTCCACTCTCTCTGCGAATATATCACTATGTCAAAATCTCTCTTACCTTGATCTCTCACAGAATCTGCTTACTGGGTCTCTACCGCACACATTGGCTGAGCTTTCTAACCTCAAATACTTAGACTTGACTGGTAACAACTTCTCTGGCGAGATACCTAGTTCCTTTGGCAAGTTTAAGAAGCTCGAAGTTCTTTCTTTGGTTTACAATCTGTTAGACGAGTCGGTTCCTGGTTTTCTCGGCAACATCACTTCGCTTAAAATGCTCAACCTTTCGTATAATCCCTTTATACCAGGTCGGATCCCGCCAGAGTTTGGGAACTTGACGAATCTCGAGGTGTTGTGGTTGACGCAGTGTAATTTTGTGGGGACGATTCCTGACTCACTTGGGAATTTGAAAAAGTTGAAGGATTTGGACCTGGCTCTGAATGACCTGTATGGTTCTATTCCGAGCTCCATTACCCAGTTAACCAGTGTGAAACAGATTGAATTGTATAACAACACATTGTCCGGTGAGTTGCCGCGGGGAATGTCGAAGCTGACTGAGTTGAGGTTGCTTGACGCGTCCATGAACCAGCTAACTGGGACTATTCCTGACGATTTGTGTAGTTTGCCATTGGAGAGTCTCAATCTCTATGAGAACCAGTTTGAAGGTGAGCTCCCGGAGAGCATAGCCAACTCGCCTAACCTGTACGAACTCAGGTTGTTCGGTAACAAGCTACGCGGTAGCTTGCCAAAAAATCTCGGCAAGAACTCGCCGTTGAAATGGCTGGACCTTTCTAACAACTTCTTCTCCGGCGAGCTTCCGGCAACTCTATGTGATAATGGAATGCTGGAGGAGCTGCTTATGATTTATAACTCTTTTACTGGTGATATTCCAGCCAGTCTTGGTGCGTGCCAGAGTTTGACCCGAGTCCGACTTGGATACAACCGATTAACCGGTGAAGTTCCGGCGTCCATGTGGGGTCTTCCCCATGTGTATCTTTTTGAACTCATTGATAACTCATTTTCTGGTCAAATAGCAAAGACTATTGCGGGTGCTTCAAATCTATCACAGTTGATAGTTTCAAGGAATAATTTCTCAGGCACATTACCAGAAGAAATAGGACGGTTGGAGAATCTGGTGGAGTTTTCTGCTAATGATAACAACCTCTCTGGGTCTTTGCCTGATAGCATTGCGAGCCTTGGACAACTTGGGATTCTCAATCTTCATAACAATGAGCTTTCCGGGGAGCTTCCAAGTAAGATTCAGGCATGGAAGAAGCTCAATGAGCTAAATTTAGCTAATAACAAGTTTATCGGAAAAATCCCTGAAGATATTGGGAGTTTGTCTGTGCTAAATTTTCTTGATCTATCAAGGAATCAGTTTTCTGGAGATATACCAGTGTCTTTGCAGAACCTGAAGCTCAATCAACTAAATTTGTCTTTTAATAGATTGTCTGGAGAACTTCCTCCTCAGTTATCAAGGGATATGTACAGGAACAGTTTTCTGGGCAATCCTGGTTTATGCGGGGACATAGATGGTTTGTGTGATGGCAGTGGTGAAGCTAAGGAAATAGGTTATGTTTGGTTTTTCAGAGCTGTTTTTGTTATAGCTGCTTTTGTCTTTGTTGCTGGAGTGGTATGGTTTTACTTCAAGTACAGGAACTTTAAGATGGCGAAAAGAGCTCTTGAGAAATCTAAATGGACATTAATGTCGTTTCATAAACTGGGTTTTAGTGAACATGAAATTTTAGATTGTCTTGATGAAGATAATGTAATTGGGAGTGGGTCTTCTGGAAAAGTTTACAAAGTTGTACTTAGCAATGGAGAGGTGGTAGCTGTAAAGAAGCTTTGGAGAGGGGTAAAGAAGGAAGCTGACAATGACGTTGAGAAAGGTGAGGTTCTTCAAGATAATGCTTTTGATGCTGAGGTTGAGACATTGGGGAAAATCAGACATAAAAACATCGTAAAGCTATGGTGCTGCTGCGTCACTAGAGACTGCAAGCTCTTGGTTTATGAGTACATGCCTAATGGTAGTTTGGGAGATCTGTTACACAGTAGCAAAGGAGGGTTGTTGGATTGGCCAACGAGGTATAAGATAGCTGTTGATGCAGCTGACGGATTATCTTATTTGCATCACGACTGTGTTCCTGCAATTGTTCACAGAGATGTTAAGTCTAACAATATTTTGTTGGATGGAGACCTCGGAGCAAGGGTGGCTGATTTTGGTGTAGCTAAGGTGGTCGAAACTGCTGGCAAGGGGACTAAGTCTATGTCTGTTATAGCTGGTTCATGTGGTTACATAGCTCCAGAATATGCTTACACTCTGCGAGTTAATGAGAAGAGCGACATTTACAGTTTCGGGGTGGTAATTCTGGAATTGGTCAGTGGAAAACGCCCAGTAGATCCTGAGTTTGGCGAAAAGGATTTGGTGAGGTGGGTCTGCACTACTTTGGATCAGAAAGGTGTGGACCATGTAATCGATCCCAAACTTGATTCGTGTTTCAAAGAAGAAATATGTAGTGCTCTCAACATTGGTCTCTTATGCACCAGTCCTCTCCCGATCAACCGGCCTTCCATGAGAAGAGTAGTGAAGCTGTTGCAAGAGATAGGTGGAGACAACCTGTCCAAGATTGCCAAGAAAGATGGGAGACTAACGCCTTACTACTACGATGATGCCTCCGAACATGGAAGTGTTGCTTGA 3012 0.4369 MPPPLLSLSCPLLCFFFLCTLPSTTLSLNQEGLYLLQFKLSLDDPSSSLSSWNERNDTPCKWFGVQCDNTTHSVTSIDLSSANVAGPLDPYLICSLTKLTSLTLFNNSINSTLSANISLCQNLSYLDLSQNLLTGSLPHTLAELSNLKYLDLTGNNFSGEIPSSFGKFKKLEVLSLVYNLLDESVPGFLGNITSLKMLNLSYNPFIPGRIPPEFGNLTNLEVLWLTQCNFVGTIPDSLGNLKKLKDLDLALNDLYGSIPSSITQLTSVKQIELYNNTLSGELPRGMSKLTELRLLDASMNQLTGTIPDDLCSLPLESLNLYENQFEGELPESIANSPNLYELRLFGNKLRGSLPKNLGKNSPLKWLDLSNNFFSGELPATLCDNGMLEELLMIYNSFTGDIPASLGACQSLTRVRLGYNRLTGEVPASMWGLPHVYLFELIDNSFSGQIAKTIAGASNLSQLIVSRNNFSGTLPEEIGRLENLVEFSANDNNLSGSLPDSIASLGQLGILNLHNNELSGELPSKIQAWKKLNELNLANNKFIGKIPEDIGSLSVLNFLDLSRNQFSGDIPVSLQNLKLNQLNLSFNRLSGELPPQLSRDMYRNSFLGNPGLCGDIDGLCDGSGEAKEIGYVWFFRAVFVIAAFVFVAGVVWFYFKYRNFKMAKRALEKSKWTLMSFHKLGFSEHEILDCLDEDNVIGSGSSGKVYKVVLSNGEVVAVKKLWRGVKKEADNDVEKGEVLQDNAFDAEVETLGKIRHKNIVKLWCCCVTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAADGLSYLHHDCVPAIVHRDVKSNNILLDGDLGARVADFGVAKVVETAGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGKRPVDPEFGEKDLVRWVCTTLDQKGVDHVIDPKLDSCFKEEICSALNIGLLCTSPLPINRPSMRRVVKLLQEIGGDNLSKIAKKDGRLTPYYYDDASEHGSVA* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00916 1003 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Pte4g00916 1003 SMART LRR_typ_2 241 265 IPR003591 -
Pte4g00916 1003 SMART LRR_typ_2 96 120 IPR003591 -
Pte4g00916 1003 SMART LRR_typ_2 289 313 IPR003591 -
Pte4g00916 1003 SMART LRR_typ_2 144 167 IPR003591 -
Pte4g00916 1003 SMART LRR_typ_2 504 527 IPR003591 -
Pte4g00916 1003 SMART LRR_typ_2 168 191 IPR003591 -
Pte4g00916 1003 SMART LRR_typ_2 192 216 IPR003591 -
Pte4g00916 1003 SUPERFAMILY L domain-like 47 279 - -
Pte4g00916 1003 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 237 972 - -
Pte4g00916 1003 Gene3D Phosphorylase Kinase; domain 1 674 777 - -
Pte4g00916 1003 SUPERFAMILY RNI-like 210 586 - -
Pte4g00916 1003 Pfam Protein kinase domain 692 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00916 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Pte4g00916 1003 FunFam Receptor-like protein kinase HSL1 314 621 - -
Pte4g00916 1003 ProSiteProfiles Protein kinase domain profile. 690 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00916 1003 Gene3D Ribonuclease Inhibitor 266 335 IPR032675 -
Pte4g00916 1003 Gene3D Ribonuclease Inhibitor 194 265 IPR032675 -
Pte4g00916 1003 FunFam Receptor-like protein kinase HSL1 673 777 - -
Pte4g00916 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 778 987 - -
Pte4g00916 1003 SUPERFAMILY Protein kinase-like (PK-like) 683 970 IPR011009 -
Pte4g00916 1003 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 28 192 - -
Pte4g00916 1003 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Pte4g00916 1003 SMART serkin_6 690 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00916 1003 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pte4g00916 1003 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Pte4g00916 1003 FunFam Leucine-rich receptor-like protein kinase family protein 210 308 - -
Pte4g00916 1003 Gene3D Ribonuclease Inhibitor 336 620 IPR032675 -
Pte4g00916 1003 Gene3D Transferase(Phosphotransferase) domain 1 778 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00916 Pte-Chr4 40280298 40284495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00916 24 1004 Receptor kinase-like Gene Family AT1G28440 72.672 0.0 1455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte4g00916 Pkinase 8.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00916 - - qsa:O6P43_031880 1526.53