Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte4g00905 | ATGTCCTCCACCACTTCTCACACCCCCACCCACACATACCTCACCAACCTTGGCCTTGGCTATGCTATAGCCATAGCTCTTGGCTTCCTTGTACTCCTCTCTACCCTCCTTCTTTCCTCGTACCTATGTTGTCGGGCTAGGAACCGTTCACGTACTCAAAACCCAACCCCAGATAATAACAACAGCGCTGAAGGGGTAGTTCTGCCACGGATCATCTTCGTTGCTGAAGATGATGACAACCAGCGGGATGAGGAAAATACTGTTGTGGGTCTCGAACAGAATGTGATTAACTCTTACCCCAAGTTTCCGTACAGTAAGGAGTCTGTGGGTACCAACAACACGATTTGTTCGATATGTTTGTGTGAGTACAAGGATTCGGAGATGTTAAGGATGATGCCGGAGTGTCGTCACTTTTTTCACCTCTGCTGTGTCGACGCTTGGTTAAAGCTTAATGGGTCTTGTCCCGTTTGCCGGAACTCTCCGCTTCCGACACCGTTGTCAACGCCGTTGTCGGAAGTCGTGCCGCTGTCTCAGTATGCAGCGGATCGAAGACGAAGGAGATGA | 564 | 0.5 | MSSTTSHTPTHTYLTNLGLGYAIAIALGFLVLLSTLLLSSYLCCRARNRSRTQNPTPDNNNSAEGVVLPRIIFVAEDDDNQRDEENTVVGLEQNVINSYPKFPYSKESVGTNNTICSICLCEYKDSEMLRMMPECRHFFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLSEVVPLSQYAADRRRRR* | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte4g00905 | 187 | SMART | ring_2 | 116 | 157 | IPR001841 | - | |
Pte4g00905 | 187 | ProSiteProfiles | Zinc finger RING-type profile. | 116 | 158 | IPR001841 | - | |
Pte4g00905 | 187 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 5 | 186 | IPR044289 | GO:0016567|GO:0016740 | |
Pte4g00905 | 187 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 162 | IPR013083 | - | |
Pte4g00905 | 187 | Pfam | Ring finger domain | 115 | 158 | IPR001841 | - | |
Pte4g00905 | 187 | SUPERFAMILY | RING/U-box | 95 | 163 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte4g00905 | Pte-Chr4 | 40121394 | 40122677 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte4g00905 | 13 | 178 | C3H Transcription Factor Family | AT5G06490 | 38.798 | 1.01e-38 | 130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte4g00905 | - | - | qsa:O6P43_027286 | 269.626 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte4g00905 | 4 | 40121394 | 40122677 | Pte4g00905 | 4 | 40121394 | 40122677 | RCT |