Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00894 ATGACATTCTACGACGCAGCTTTTGTGAACAAACAGCTAGCAAAGAAGACATCAATCTTCGGACTTCATCTGTGGGTTGTCATTGGAATCTTTGTTGGTTCAGTTATCGTTCTCACTCTCTTTCTCCTCTCTCTCTGTCTCACCTCTCGCCGTCAACGCCATAAAAGCAAAAAAAACAAGCTTTCTGACATACATGATTCTAGAACACCTGTAGTTTCGAAGGAAATCCAGGAGATCGTGCACATAACAGCACCCAATCACCATTACCCACCACCTTTGCCGGAGATCCAGGTTGCTATAGGGAAGCCTGAGCACAGAGTCGTCGTTTACTCTGATCGGGTTTCGAGTGGGGAAAGCAGAGGAACTGTCAGTGCATGTGAAACAACATCGTCTTTTGGAAGTGGCAGTGTGGGGCCGGGGGTCTCCCATCTTGGCTGGGGCAGATGGTACACTTTGAGAGAGCTAGAGACTGCAACTAATGGATTGTGTGAAGAGAATGTGATTGGGGAAGGTGGGTATGGGATAGTGTATGGTGGAACACTCACTGATGGTACCAGGGTTGCCGTAAAAAACCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTAGAGGTGGAAGCAATAGGTCGTGTTAGGCACAAAAATCTAGTGAGATTACTTGGGTACTGTGTTGAGGGTGCCTACAGGATGCTTGTCTATGAATATGTAGATAACGGAAATCTGGAGCAGTGGCTTCATGGGGATGTGGGAGATGTAAGCCCTATGTCATGGGATATCCGAATGAACATTATTTTGGGGACTGCAAGAGGATTAGCTTATCTTCACGAGGGACTTGAGCCAAAGGTTGTTCATCGTGATGTCAAATCAAGCAACATACTCCTTGATCGCCAGTGGAATCCTAAGGTTTCTGATTTTGGACTTGCTAAGCTCTTGTGCTCCGAGAGGAGTTATGTCACAACTCGAGTAATGGGGACATTTGGCTATGTCGCACCTGAGTATGCCTGCACGGGGATGCTTACTGAGAAGAGTGATGTTTATAGTTTTGGCATTCTTATCATGGAGCTAATTTCTGGAAGAACCCCTGTTGATTATTCTAGACCACAAAGAGAGGTCAATTTAGTAGATTGGTTGAAAAATATGGTCGGCAATAGAAAATCAGAGGAGGTTGTTGATCCTAAGCTGCCAGAGATGCCGTCGTCCAAGGCACTTAAACGTGTGTTGCTGATTGCTTTGAGATGTGTTGATCCTGATGCCTCAAAGAGGCCTAAAATGGGACATGTTATTCACATGCTTGAAGCAGATGATTTAATTTTTGGCGACGTACGGTCCATCTTTTGA 1344 0.4531 MTFYDAAFVNKQLAKKTSIFGLHLWVVIGIFVGSVIVLTLFLLSLCLTSRRQRHKSKKNKLSDIHDSRTPVVSKEIQEIVHITAPNHHYPPPLPEIQVAIGKPEHRVVVYSDRVSSGESRGTVSACETTSSFGSGSVGPGVSHLGWGRWYTLRELETATNGLCEENVIGEGGYGIVYGGTLTDGTRVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGDVSPMSWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMELISGRTPVDYSRPQREVNLVDWLKNMVGNRKSEEVVDPKLPEMPSSKALKRVLLIALRCVDPDASKRPKMGHVIHMLEADDLIFGDVRSIF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00894 447 ProSiteProfiles Protein kinase domain profile. 162 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00894 447 Pfam Protein kinase domain 165 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00894 447 Gene3D Transferase(Phosphotransferase) domain 1 238 440 - -
Pte4g00894 447 ProSitePatterns Protein kinases ATP-binding region signature. 168 190 IPR017441 GO:0005524
Pte4g00894 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Pte4g00894 447 CDD STKc_IRAK 168 434 - -
Pte4g00894 447 Gene3D Phosphorylase Kinase; domain 1 146 237 - -
Pte4g00894 447 FunFam Putative receptor-like serine/threonine-protein kinase 238 446 - -
Pte4g00894 447 SUPERFAMILY Protein kinase-like (PK-like) 142 434 IPR011009 -
Pte4g00894 447 FunFam Probable serine/threonine-protein kinase At1g01540 142 237 - -
Pte4g00894 447 PANTHER OS01G0323000 PROTEIN 7 440 - -
Pte4g00894 447 SMART serkin_6 162 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00894 Pte-Chr4 40040349 40045803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00894 134 434 Receptor kinase-like Gene Family AT4G02010 47.869 9.14e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte4g00894 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00894 - - rcu:8286672 714.146