Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00885 ATGGCAGGGTGGTCGATGGTAGCTGGTGCGTCTGCTGTAGATAGTGCTAAAACCCCGAAGAAGCTTGAACCAGGCGGGTGCTTGGTCGATCTCGATTCGGTTTCTGAAACTTACGTCGTTGCAGTAGGAAGCGATTCCGGTAAAGCTCGGCGCTTGTTTAATCAATTTCTTGTTCGCTTTCTGAAAGAGATCTGTCCCGAAGATTCTTACCGGCCTGGTTCTCCAATGGTTGAAAATGGCCAGTTTGTAGATTTGCATAAGCTCTTCATGGTTGTGAGAGAGAAAGGTGGGTATGAAGCTGTATCTAGAAATATGTCGTGGGATTCTGTGGCCGAAGAGTTTGGTTTGGGTGTAGATGTTGGTTCAGCAGTGAAGCTAGTTTACGTTAAGTACTTGGATACTTTTGAGAGATGGCTAAAGATTGTTGCTGATAATACGGATTGCGGGGTGAGCAATACTCACATTGATTTCAGTAGGCTTCCGATGAAATTACATTCGGAAGTTAAGGGGTTTTTGCCCGAAAAATCAGGTCCAGAAAAGGTAGTTGACGTGCGGAGACAATTGGATAGGTCATTTTCTGATGTGGTAGAGTTGTGTGATGCAGAGGAAGTTAAAAACATAGTTGTTGAGCTCGGCCAAACGATGATAGTTGATCATAACGGGATCATTCACTTAGATTCCTCCGAGAAGACGCAGAATGTAACTACATATGAGGAATTTAATAATCTTCATAAGGCAAGAAAGGAGTTGGAAGATTTTGGTCCAGATATTGGGGATAGTTGTGAATTAAATAGGAATTTTGAAAAGCAAAATAGGAAAGATGTTCATGATGATGATATCGATGATTTCAAAGTAATTGATCCAGTGAGTGTTGATAAAGACAGTGTTGGCAGGAAGAGGAAGAGAGGGTCTTTGTGGGAAGTTGTAAATTGGATCACTGGCATTGCAAAAAACCCATGTGATCTCATGGTGGGTTTGATGCCCGAAAAGTTGAAGTGGAAGTCCATTGCAAACAAGGAAATGTGGAAGCAAGTATTGTTGTTTAGAGAAGCTAGCTTTATGAAGAGACATGTTGAGACAAGTGCTGAGCAATTGAATTGGCAGAACCAGAAGATGCATCCTTGCTTATATGAGGATAGTGTTGGCTCTGTGTACAATCTGAGGGAAAGATTGAAATGTGACAGGCAGATTTTAACATCTGCCAAACGAGCTTCATCAGAATCATTGTCAAGTGACGTGGATAAAACTTCTAGCAATGGCGTGAAAGGGGCAGAAGATAATGCTGACAAATATGAACATAAGCTTACGCCCCTGGGACCAACCTTTCAAGCCAAAGTTCCAGAATGGATTGGCTATACTTCTGAAAGTGATTCTAAGTGGTTAGGTACCAAGGTCTGGCCATCAGAAAAAATAAATAACAGATACCTTATTGAACGTGATCCCATGGGAAAAGGAAGACAAGATTCTTGTGGCTGTCCTGTACCAGGTTCTATAGAGTGTGTTAGATTTCATATTTCTGAGAAAAGGTCTAAACTGAAGCAGGAATTAGGTGTAGCATTTTATGCCTGGGAGCTTCATAAGGTTGGTGAAGAAGTTAATCTCTGTTGGACTGAGGAAGAAAAGAATAGATTCAACAATGTGGTGACATCAAATACTTCTTCTGGCGTAAACAGTTTCTGGGACAAAATTTTTAAGGAATTTCCTACCAAGAACAGGGAACATTTGGTTAGCTACTACTTCAATGTTTTCCTTCTGAAGCGCAGAGCTAACCAGAATAGGCATACTCTGAATAATATTGACAGTGATGATGATGAAACAGAATGTGGACTGAGAAATGTTTTTGGACATCAACCGCAGAAGTCTGGTAAGTCCATATTAATTTCTCCGAAAAAGACACAAACCAAGTTAAGATAG 1914 0.4096 MAGWSMVAGASAVDSAKTPKKLEPGGCLVDLDSVSETYVVAVGSDSGKARRLFNQFLVRFLKEICPEDSYRPGSPMVENGQFVDLHKLFMVVREKGGYEAVSRNMSWDSVAEEFGLGVDVGSAVKLVYVKYLDTFERWLKIVADNTDCGVSNTHIDFSRLPMKLHSEVKGFLPEKSGPEKVVDVRRQLDRSFSDVVELCDAEEVKNIVVELGQTMIVDHNGIIHLDSSEKTQNVTTYEEFNNLHKARKELEDFGPDIGDSCELNRNFEKQNRKDVHDDDIDDFKVIDPVSVDKDSVGRKRKRGSLWEVVNWITGIAKNPCDLMVGLMPEKLKWKSIANKEMWKQVLLFREASFMKRHVETSAEQLNWQNQKMHPCLYEDSVGSVYNLRERLKCDRQILTSAKRASSESLSSDVDKTSSNGVKGAEDNADKYEHKLTPLGPTFQAKVPEWIGYTSESDSKWLGTKVWPSEKINNRYLIERDPMGKGRQDSCGCPVPGSIECVRFHISEKRSKLKQELGVAFYAWELHKVGEEVNLCWTEEEKNRFNNVVTSNTSSGVNSFWDKIFKEFPTKNREHLVSYYFNVFLLKRRANQNRHTLNNIDSDDDETECGLRNVFGHQPQKSGKSILISPKKTQTKLR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00885 637 SUPERFAMILY ARID-like 49 143 IPR036431 GO:0003677
Pte4g00885 637 ProSiteProfiles ARID domain profile. 47 140 IPR001606 GO:0003677
Pte4g00885 637 Gene3D - 39 147 IPR036431 GO:0003677
Pte4g00885 637 SMART bright_3 48 141 IPR001606 GO:0003677
Pte4g00885 637 CDD ARID 50 136 - -
Pte4g00885 637 MobiDBLite consensus disorder prediction 616 637 - -
Pte4g00885 637 SMART ELM2_2 436 487 IPR000949 -
Pte4g00885 637 SMART ARID_2 44 136 - -
Pte4g00885 637 Pfam ARID/BRIGHT DNA binding domain 63 136 IPR001606 GO:0003677
Pte4g00885 637 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 47 632 - -
Pte4g00885 637 MobiDBLite consensus disorder prediction 617 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00885 Pte-Chr4 39941633 39947100 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pte4g00885 ARID 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00885 - - qsa:O6P43_027249 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00885 4 39941633 39947100 Pte4g00885 4 39941633 39947100 RCT