Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00867 ATGGGAATTAACTTCTCACAACTCTTGCCATGCTGCTGGAGGTCACAACTTAAGGCATCCCTTCTTGAGACTGCAGATGATGAGAAAGAGGAAAGCTGCGAGACCAGTTACTTGCCTGCATTTCGTGAATTCACATTGGAGCAACTGAGAAATGCTACATCTGGTTTTGCTGCGGACAATATTGTATCAGAGCATGCAGAAAAGGCTCCAAATGTAGTTTATAAAGGGAAGCTGGAAAATCAGATGAGAATTGCTGTTAAACGCTTCAATAGGAATGCGTGGCCTGATGCTCGGCAATTTTTGGAAGAAGCACGATCGGTGGGCCAACTCCGTAACCACCGATTGGCAAATTTGCTTGGTTGTTGCGGTGAAGGAGATGAAAGGTTGCTTATTGCAGAATTTATGCCCAATGAAACACTTGCAAAGCATCTCTTCCACTGGGAAGCACAACCTATGCAATGGACAATGCGACTGAGAGTTGTACTACATCTTTCCCAAGCTCTAGAGTACTGCTCAAGTAAAGGCCGTGCACTTTATCACGACCTCAATGCTTACAGAATTTTATTTGACGAGGATGGGAACCCTAGACTTTCAAGCTTTGGGCTTATGAAGAATAGTAGGGACGGGAAAAGTTATAGCACCAATCTGGCATTTACTCCTCCCGAGTATCTTAGAACAGGGAGAGTCACACCTGAAAGTGTGATATATAGCTTCGGTACTCTTTTGCTTGACCTTCTCAGTGGGAAGCATATTCCCCCTAGTCACGCCCTTGACTTGATTCGGGATAGAAACCTGCATATGTTGACAGATTCTTGCTTGGAAGGAAAGTTTTCTGAAGATGATAGGACTGAGTTAGTACGCTTGGTCTCTCGATGTCTTCAATATGAACCTAGAGAACGGCCTAATTCAAAGTCCTTGGTAGCTGCTTTGACTCCTCTTCAAAAGGAAACAGAGGTGCCTTCACATGTCTTGATGGGTATTCCTCATAGTGCTACTTTGTCTTCTCTGTCTCCACTTGGTGAAGCTTGCTCAAGAAGGGACTTGACTGCCTTACATGAAGTTCTGGAAAATATTGGCTATAAGGATGATGAAGGAGTAACAAACGAGCTGTCGTTTCAGATGTGGACTGACCAAATGCAGGAAACGTTAATTTCCAAAAAAAAGGGCGATCATGCATTTCGTCAGAAAGATTTTGGACTTGCAATAGAACTCTACACACAGTTCATTGATGTTGGCACAATGATATCTCCCACAGTTTTTGCAAGGCGTAGTCTATCTTATCTCATGAGTGACATGGCTCAAGATTCGCTGAATGATGCAATGCAAGCACAGGTCATTTCTCCAACGTGGTACATTGCATCATATCTTCAGGCTGCTGCGCTTTCTGCACTTGGGATGGACAATGAAACTAGAATAGCATTGAGAGAGGGCACTACTCTAGAAGCCAAGTGGAGGGAGAAATGA 1464 0.4385 MGINFSQLLPCCWRSQLKASLLETADDEKEESCETSYLPAFREFTLEQLRNATSGFAADNIVSEHAEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNHRLANLLGCCGEGDERLLIAEFMPNETLAKHLFHWEAQPMQWTMRLRVVLHLSQALEYCSSKGRALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLHMLTDSCLEGKFSEDDRTELVRLVSRCLQYEPRERPNSKSLVAALTPLQKETEVPSHVLMGIPHSATLSSLSPLGEACSRRDLTALHEVLENIGYKDDEGVTNELSFQMWTDQMQETLISKKKGDHAFRQKDFGLAIELYTQFIDVGTMISPTVFARRSLSYLMSDMAQDSLNDAMQAQVISPTWYIASYLQAAALSALGMDNETRIALREGTTLEAKWREK* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00867 487 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Pte4g00867 487 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Pte4g00867 487 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Pte4g00867 487 FunFam probable serine/threonine-protein kinase At4g35230 380 487 - -
Pte4g00867 487 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 483 IPR045845 GO:0004672|GO:0009742
Pte4g00867 487 Pfam Protein tyrosine and serine/threonine kinase 73 309 IPR001245 GO:0004672|GO:0006468
Pte4g00867 487 ProSiteProfiles Protein kinase domain profile. 46 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00867 487 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Pte4g00867 487 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Pte4g00867 487 Gene3D Tetratricopeptide repeat domain 381 486 IPR011990 GO:0005515
Pte4g00867 487 SUPERFAMILY TPR-like 385 480 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00867 Pte-Chr4 39781016 39786568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00867 30 310 Glycoside Hydrolase AT3G07070 32.566 2.75e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte4g00867 PK_Tyr_Ser-Thr 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00867 K14500 - qsa:O6P43_017614 845.499