Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00866 ATGGTTTTCTTAGGCGGGCATATCAACCCTATTGTCACTTTCAGTTTGTTCCTAGCAAGGAAGCTTTCAATGACCAGAGCTGTATTCTACATGGTGATGCAATGTCTTGGAGCCATTTGTGGTGCTGGGATCGTCAAAGGGTTCCAGCCTAAACAATATAAGAACTGGGGTGGTGGAGCCAACGTGGTGAACCGTGACTATACTAAAGGTTACGGTCTTGATGCTAAGATTGTGGAAATCTTTATTCCTATCTACACTGTATTTTCTGCAACAGATGCTAAAAGGAATGCCAGAGACTCCCATGTTCCTACAAATATTAATAGTATAGGTATTGCTTATCCAAAGTATTCTCCATTACTTGTAAGAGATATACAAATATTCAGTTACGTCACTTTACTAGAAAACTTAAACCAAAGAATTTTTGGTGCACTTGGCTACCATTCCATCACTGGAACTGGTATCAACCCAGCCAGGAGTCTTGGAGCTGCCATCATTTACAGCAAGGAACATGCTTGGGATGATCATTTTTGGATAGAACCTCACATGATATTTCTGACTGTTCAAGTGGATCTTTGGGTGGGACCATTTATTGGAGCTGCACTGGCTGCTTTGTATCACCAAATAATCATCAGAGCCATTCCCTTCAAGACAAGAGCTTGA 660 0.4121 MVFLGGHINPIVTFSLFLARKLSMTRAVFYMVMQCLGAICGAGIVKGFQPKQYKNWGGGANVVNRDYTKGYGLDAKIVEIFIPIYTVFSATDAKRNARDSHVPTNINSIGIAYPKYSPLLVRDIQIFSYVTLLENLNQRIFGALGYHSITGTGINPARSLGAAIIYSKEHAWDDHFWIEPHMIFLTVQVDLWVGPFIGAALAALYHQIIIRAIPFKTRA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00866 219 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 214 IPR034294 -
Pte4g00866 219 Pfam Major intrinsic protein 5 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g00866 219 Pfam Major intrinsic protein 147 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g00866 219 Gene3D Glycerol uptake facilitator protein. 2 217 IPR023271 -
Pte4g00866 219 PRINTS Major intrinsic protein family signature 189 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g00866 219 PRINTS Major intrinsic protein family signature 136 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g00866 219 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g00866 219 PRINTS Major intrinsic protein family signature 75 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte4g00866 219 SUPERFAMILY Aquaporin-like 4 211 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00866 Pte-Chr4 39758185 39759107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00866 5 220 Major Intrinsic Protein MIP AT1G01620 60.648 1.73e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00866 K09872 - aew:130764984 239.58