Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00859 ATGGAGGATTTGATGAAAGCAAATGAAAACGTGTCAATGTTCTCAGCGGCGCGAAACCGCGCCGTCCGGTTTCTGTCCAATCCTTCAGGGAAAGGGGAGATGAGTACTTGTGGAGGAAGTATTGGTGGCGGTGGTGGGCCTTGTGGTGCTTGCAAGTTCTTGAGAAGGAAGTGTGTGAAAGAATGCCTATTTGCACCATATTTTGACTCAGACCAAGGAACTACTCATTTTGCAGCTGTACACAAAGTGTTTGGAGCTAGCAATGCATCCAAGTTGCTCATGCGTATCCCAGCTCACAAGCGTCTCGATGCTGTGGTTACTCTCTGTTATGAGGCTTTGGCTAGGGTTAGTGACCCTGTGTATGGCTGTGTGGGTCACATCTTTGCTCTCCAGCAACAGGTGTTGAACTTGCAGGCAGAGCTAGCTTTTGTTCAAGCCCGTCTTTCAACATTTCAGGGACTTACTCTAACACCACCTCCACCTCAACTGCAGACCTCCTCATCACCAAGAAGTGATCTGCATTCAGATTTAACATCAGTTACAGACATGCAGTCCAAGAATTCTAGCTTGCCCATACATTTTGGCTGCACTCTTCAGCCACATGCAACATCAATGAAACTCACAAGCTTTTGCAACCAAAATATTCCATTGGATGGAGAATATGAGAATGAAGATGTTCAAGCTTTGGCACGAGAATTTGTTTCTAAGCACTTGGCCGGAGTAAGATTCCGGTAA 735 0.4626 MEDLMKANENVSMFSAARNRAVRFLSNPSGKGEMSTCGGSIGGGGGPCGACKFLRRKCVKECLFAPYFDSDQGTTHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARVSDPVYGCVGHIFALQQQVLNLQAELAFVQARLSTFQGLTLTPPPPQLQTSSSPRSDLHSDLTSVTDMQSKNSSLPIHFGCTLQPHATSMKLTSFCNQNIPLDGEYENEDVQALAREFVSKHLAGVRFR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00859 244 PANTHER LOB DOMAIN CONTAINING PROTEIN 44 181 - -
Pte4g00859 244 Pfam Lateral organ boundaries (LOB) domain 47 145 IPR004883 -
Pte4g00859 244 Coils Coil 127 147 - -
Pte4g00859 244 ProSiteProfiles LOB domain profile. 46 148 IPR004883 -
Pte4g00859 244 MobiDBLite consensus disorder prediction 157 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00859 Pte-Chr4 39699441 39708591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00859 39 244 AS2 family AT4G00210 55.455 9.55e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte4g00859 LOB 6.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00859 - - jre:109010337 255.758