Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00853 ATGGTGTTGCAGTCAGTCACTCTGCACACCAACCTCGGTGACATCAAGTGTGAAATCTTCTATGACGAGGCTGCCAAGGCAGCTGAGAATTTCTTGGCACTCTGTGCAAGTGGATATTATGATGGGACTATATTTCACCGCAAAATCAAAGGCTTAATCATTCAAGATGGAGATCCAACAGGCACTGGGAAAGGAGGGACGAGCATATGGGAAATCAACGCAAATCCATGGTCATCAAGCATTACACATCAACACAAACATGAAGATAAATTTGTAATTAGTTTAATAAGTGAAGAAGTACTTTGTATTATACACGACATGAAGCTCATCAAGGTTGTAAGATTTACCTGGTTTGCAAGACTGCGACGGCCAACAAGAAAGTTTGAAGGGGAGTTCTGCAACACGAACAGAGACGCAGCGTTTGGGGAAGTCAGAGACAGAGAGAGGCAGAGAGCTATCGGGGGTTCTGCAACAGGAGCTATCGGGGGTGTTCTGCAACGCAGCAACAGCCTCTGCAACAGCCAATAA 528 0.4527 MVLQSVTLHTNLGDIKCEIFYDEAAKAAENFLALCASGYYDGTIFHRKIKGLIIQDGDPTGTGKGGTSIWEINANPWSSSITHQHKHEDKFVISLISEEVLCIIHDMKLIKVVRFTWFARLRRPTRKFEGEFCNTNRDAAFGEVRDRERQRAIGGSATGAIGGVLQRSNSLCNSQ* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00853 175 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 2 175 IPR002130 GO:0000413|GO:0003755
Pte4g00853 175 SUPERFAMILY Cyclophilin-like 5 93 IPR029000 -
Pte4g00853 175 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 4 94 IPR044666 -
Pte4g00853 175 Gene3D - 2 103 IPR029000 -
Pte4g00853 175 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 96 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00853 Pte-Chr4 39650801 39660415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00853 6 95 U-box Gene Family AT5G67530 44.444 1.11e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00853 K12734 - tcc:18614279 125.561