Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00850 ATGGAACTTCGACAACCTCATCAGACAACTTCAGACTCTGGAGGAGGAGAAGGGAGTGGACCCCAGAAGAAGAAAATTGACAAGGGGCAGTCGGTGGCGGTGGCGGGTGTTGTTGATGACGACAACAGCAACTACTACAAGGGTGTTCTGGTCAAGCAACAACAAGACTACTCTTCTTCATACAGACTTGATCTTGGAGTTGCTGCTTCCGCTGGCTCAAACACGTTAGCTGTATCAGGCGTTGGGTCTGAAGCTGGTGTAGTCACTGAAGTTTTAGGATTCAGTACTCAGGAGTTTGATTTTGGAAACATGGTGGATCCTGAATCAGGAAGGTGCAGAAGAACAGACGGAAAGAGATGGAGGTGCGGTAGGAATGCAATACCACTTGAGAAGTACTGCGAACAACACATGCACAGAGGCCGAAATCGTTCAAGAAAGCATGTGGAATCATTGGAAACTAAACCCCCTCCAGTGGAACTGCCATCTGCAAAATCAGATTCTCGTCCTTGCATTAAATCCACACCTTCAAAACCAAGAGACACTCCGACTATGAACTCACCTGCTGCTAAATTTGACAATAGCCTCTGTGTTGTCGCCAATACCACCCCTAGTTGTTCAGATAAAAATGGTAACTCTTGCGGTGCCACAATAGTTCCCATTACTGCATCGTGTCCCACCATTGCATCCTCCCCTGCTTCTACCGGCTCTGAGGATGTCACCAAGACTGAAACTGATAATGGGGTATCTGTTTCATCCAACAATGCAGATAACAAGAAATATGATGAGGAAAACAACAGTACCAAGAATTTTGTCGGCATGGATTACCATATTATGATTAGATGTAGTGAAGATAAAAAACATGCATACTCTTCCACTCTGGTCTCCGATGGAATAGACATCTCAGCTGAGAGTGTTCTTCCAGTTTCAGGTTGTAAAGATAAGGACAGGATTGCTGGTGTTGAAATTGAAATGAGTAGATGTCGAAGAACAGATGGGAAGAAATGGCGTTGTAAAAGGGATGTTCTTCCTCTACAGAAGTATTGTGCGAGGCACATGCATAGAGGAGCTAAACGGCGTCAGGAAATTCCCCAACCTGTGACAGCTGCAGTCAAATCTGCTGCCGCCACCCCAAGTGATCGGTTGGCCTTCCACACCGCTGCCCCTGTATTTACAAAAGCACAGGTATTCTCTCCAAGTACAAAACTGTCTATGTCAATCTCAGGTAGGCCTCAGCTGATACATGAAGATAATGAAAAAAGTGTTTGTAGCAGTGATACCGACACCACTATCAGCGATTCTTTTAGTGATTATACCAATGTGGCTACTTAG 1329 0.4522 MELRQPHQTTSDSGGGEGSGPQKKKIDKGQSVAVAGVVDDDNSNYYKGVLVKQQQDYSSSYRLDLGVAASAGSNTLAVSGVGSEAGVVTEVLGFSTQEFDFGNMVDPESGRCRRTDGKRWRCGRNAIPLEKYCEQHMHRGRNRSRKHVESLETKPPPVELPSAKSDSRPCIKSTPSKPRDTPTMNSPAAKFDNSLCVVANTTPSCSDKNGNSCGATIVPITASCPTIASSPASTGSEDVTKTETDNGVSVSSNNADNKKYDEENNSTKNFVGMDYHIMIRCSEDKKHAYSSTLVSDGIDISAESVLPVSGCKDKDRIAGVEIEMSRCRRTDGKKWRCKRDVLPLQKYCARHMHRGAKRRQEIPQPVTAAVKSAAATPSDRLAFHTAAPVFTKAQVFSPSTKLSMSISGRPQLIHEDNEKSVCSSDTDTTISDSFSDYTNVAT* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00850 442 MobiDBLite consensus disorder prediction 1 17 - -
Pte4g00850 442 MobiDBLite consensus disorder prediction 229 255 - -
Pte4g00850 442 ProSiteProfiles WRC domain profile. 106 150 IPR014977 -
Pte4g00850 442 MobiDBLite consensus disorder prediction 229 261 - -
Pte4g00850 442 Pfam WRC 323 360 IPR014977 -
Pte4g00850 442 Pfam WRC 107 149 IPR014977 -
Pte4g00850 442 ProSiteProfiles WRC domain profile. 321 368 IPR014977 -
Pte4g00850 442 MobiDBLite consensus disorder prediction 138 188 - -
Pte4g00850 442 MobiDBLite consensus disorder prediction 167 188 - -
Pte4g00850 442 PANTHER GROWTH-REGULATING FACTOR 5 309 408 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte4g00850 442 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00850 Pte-Chr4 39623130 39626364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00850 323 358 GRF Transcription Factor Family AT3G13960 66.667 1.59e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00850 - - qsu:112008889 207.608