LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte4g00845	ATGCCATCCCGGCATTCTCTCTCACCGTCTGCGACACCTACGCCAACCGACATCCATCACCACCACCACCACCACGGATTTTATTTCAACCAAGCAATACTTGCTGGACTACTGAGTCTTGCACTCGTTTTGTTCCTCTTCATCATTGGTCTCACCATCTTCATCTACCGGAAGCTCTCATACAGCCGTACTGCTCCTTTTGACAGCTACTACCAAAACATCCACCGTCGCTTCTCTTACTCACTCCTCCGTCGTGCAACTAACTCTTTCTCCGCATCTACTCGTCTTGGTCATGGTGGGTTTGGCTCAGTTCATAAGGCTACACTGCCCTCCGGTCAGTCTGTAGCTCTCAAACTCATGGACTCTCCTGGTTCACTGCAAGGTGAGCGTGAGTTTCACAATGAGCTTTCACTTTGTTCTCAGCTGAATTCACCTTATATTATTTCACTTCTTGGTTTTTCCTCCGACCGACGTGGTCGGAAGCTTATCTTGGTCTATGAGCTAATGCCTAATCGGAGTTTGCAAGATGCTCTGTTAGACAAGAGGTGCGTTGAGCTTACGGAATGGAATAAGAGGTTCCAAATCGCTATTCAAATTGCCAAGGGCATTGAGTATCTTCATCATCACTGCAATCCTCCGGTGATTCACGGTGATATCAAGCCCAGTAATGTTTTGTTGGATTCTGATTTTTCAGCTAAAATTGGAGATTTTGGTTTGGCTAGGTTGAAAACAGAGGATCTGGGAATGCTGGAAGAGAACGGCGGCGAGGGTGGTGAGATTGTGAAGAAAGATGGGGTTGTTGAGCTTGGTGATGAAAATGGGTCGATTTTGGAAGAGACTGAGAGTGTGCTAACGGGTTTTGAGGAAGGTAGTGGGGTTGTTGATCGATCACCTGAGAGTTCTGCTGTCAGGATTCCAGATTCAGAGGCATCCCCCGAGACACTATCGGTGTCACCAGAGATGGGAACTGATAAGGTGAGTGTATCAGAAGGTTGTTATGATAAGTTTAGTGTTGATAGTAGTAAAGATTTAATTAGTAATGGTAGGAGAAAAGGTGGTTCCGGAAGAGATTGGTGGTGGAAACAGGACAATGGAGGAGGGTCTGAATCAGGTAGAGTGAAGGACTATGTGATGGAATGGATAGGGAGTGAGATAAAGAAGGAGAGGCCAAAGACTGGATGGCTTACATCTCCAAGCTCTGTAGAGACCAATGGGCAAAGTTCCAAACTTGAGCAGAAGAAGAAACAAAAGAAGAGATTGGAATGGTGGGCTTCATTGGATGAAGAGAAAGTTAAGAAGAAAGAGAAGAACAGGAAACCTAGAGAATGGTGGAAGGAAGAGTTCTGCGAGGAGCTTTCAAAGAAGAAGAAAAAGAGAGGGCTAGATTCAACTAGTGCAGAATCATGGTGGCAGAAGGATGAAGAGTTAGTACAAGAGAGGAAGAAGAAGAGAAAGAGTACTAAAAGTAGTAGAGGCAGTATTGATTGGTGGTTGGATGGTTTGAGTGGTGAGCTTAGAAATGGAAGAAGGACTAGTCAAGAATGGGCTAGTGGCGATATCCCAAAGAGTGGTGGAATTAGCAGCACGCCAAGTATGAGAGGAACTGTTTGTTACATTGCTCCGGAGTATGGTGGTGGAGGACAACTCTCAGAGAAGTGTGATGTTTATAGCTTTGGAGTATTGCTTTTGGTTTTGGTAGCAGGTAGGAGGCCTCTGCAAGTAACAGCATCACCAATGTCAGAATTTGAAAGGGCTAATCTTATTTCATGGGCAAGACAACTAGCTCGCAATGGGAAGCTATTGGATCTTGTTGATCAATCTATTCATACGTTGGACAAGGAACAGGCATTGCTCTGCATCACAATTGCATTGCTGTGTTTGCAAAGATCACCTACGAAGCGTCCTACCATGAAAGAGATAGTGGAAATGCTTTCTGGGGAGGCTGAGGCACCCCACCTGCCTTTTGAGTTTTCACCATCACCACCATCTAATTTTCCGTTCAAGTCCAGAAAGAAAGCTAGGTGA	2025	0.4528	MPSRHSLSPSATPTPTDIHHHHHHHGFYFNQAILAGLLSLALVLFLFIIGLTIFIYRKLSYSRTAPFDSYYQNIHRRFSYSLLRRATNSFSASTRLGHGGFGSVHKATLPSGQSVALKLMDSPGSLQGEREFHNELSLCSQLNSPYIISLLGFSSDRRGRKLILVYELMPNRSLQDALLDKRCVELTEWNKRFQIAIQIAKGIEYLHHHCNPPVIHGDIKPSNVLLDSDFSAKIGDFGLARLKTEDLGMLEENGGEGGEIVKKDGVVELGDENGSILEETESVLTGFEEGSGVVDRSPESSAVRIPDSEASPETLSVSPEMGTDKVSVSEGCYDKFSVDSSKDLISNGRRKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKTGWLTSPSSVETNGQSSKLEQKKKQKKRLEWWASLDEEKVKKKEKNRKPREWWKEEFCEELSKKKKKRGLDSTSAESWWQKDEELVQERKKKRKSTKSSRGSIDWWLDGLSGELRNGRRTSQEWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPMSEFERANLISWARQLARNGKLLDLVDQSIHTLDKEQALLCITIALLCLQRSPTKRPTMKEIVEMLSGEAEAPHLPFEFSPSPPSNFPFKSRKKAR*	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte4g00845	674	MobiDBLite	consensus disorder prediction	290	326	-	-
	Pte4g00845	674	Gene3D	Phosphorylase Kinase; domain 1	65	168	-	-
	Pte4g00845	674	SMART	serkin_6	90	644	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte4g00845	674	Pfam	Protein kinase domain	529	642	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte4g00845	674	Pfam	Protein kinase domain	92	243	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte4g00845	674	MobiDBLite	consensus disorder prediction	344	371	-	-
	Pte4g00845	674	FunFam	Os07g0541700 protein	169	252	-	-
	Pte4g00845	674	PANTHER	OS07G0586332 PROTEIN	1	674	IPR044576	-
	Pte4g00845	674	ProSiteProfiles	Protein kinase domain profile.	90	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte4g00845	674	ProSitePatterns	Protein kinases ATP-binding region signature.	96	118	IPR017441	GO:0005524
	Pte4g00845	674	MobiDBLite	consensus disorder prediction	389	414	-	-
	Pte4g00845	674	MobiDBLite	consensus disorder prediction	652	674	-	-
	Pte4g00845	674	Gene3D	Transferase(Phosphotransferase) domain 1	169	260	-	-
	Pte4g00845	674	Gene3D	Transferase(Phosphotransferase) domain 1	500	652	-	-
	Pte4g00845	674	MobiDBLite	consensus disorder prediction	393	407	-	-
	Pte4g00845	674	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	214	226	IPR008271	GO:0004672\|GO:0006468
	Pte4g00845	674	SUPERFAMILY	Protein kinase-like (PK-like)	67	663	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte4g00845	Pte-Chr4	39566216	39569587	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte4g00845	522	644	Receptor kinase-like Gene Family	AT3G58690	37.209	7.99e-15	75.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XI	Pte4g00845		Pkinase	4.2e-29	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte4g00845	-		-	qsa:O6P43_017512	1007.67