Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00841 ATGGATCATCATGGCTCTTCATCTTCATACCCATATCAGAGTCCATACGCATATCCTCCTCCTCCTTCTGCATATCCACCTTCAAATCAACCACCTTACCCTCCTCCTCCTTCCTATCCATATCCATATAGTTCTTCGAATTCATTCAACTATCCTTATCCACCACCACCACATGCATCTTCTGCCTCTCATTCAGGTCACTTAGAGTATACTGGATCTCATTCTGGTCATTTAGACTATGCCAGGCCTCCACTATCTTATTCTGGCTCACTAGACTATGCCATGCCTCCATCGACTCATTCTGGTTCTAGCCTTTATCCAAACCTGGACCCTGCGCCTCCTCCTCCTCCTCCTCCAGCGACACACACTGGTTGTTTGTCTGGTCTCCAGCAACAAAGTAGTTTTCAGTATGGGGTGCCTCATCACCATTACGAACAGTCTGCCCCGTATCCACCTCCTGAAAACCAAAACCCGGTCCCATCACATGCAACTAGTTTCACAGATGTCTATAGGCAGGATAGTATAAGCTATGGGGCAATGGGATCATCCCAAAACATTGACAACTCTGTTCCTTCTCATTTATCTGGTTATCCGACTTTGGATGTTTCTATGAGCAATCTTCATCTGTCTGATAACTGTCAATCTGCCCCTGCATCACCACCTGCACCATCGTTGGTGACTGCTCAAAGTGAAAGGTTGTACGGTTATCCCAATAACACTTTTACCAGTTCGTATTCTGGGAACCTTGGTCGACCGAGTCCTTCTGCTCTTTCCTATTCAGGTTCGTTTGATGCATCAAATCATGGCCAGAGTACGCAGATTGTGCCATTGCAAGGAAAAGGGTCCTTGAAAGTTCTGCTCTTACATGGGAATTTAGATATATGGGTTCACGAAGCAAAAAATCTTCCAAATATGGACATGTTCCATAAAACATTGGGTGACGTGTTCTCCATGCTACCGGGGAATGTAAGTAACAAGATTGAGGGACAAATGTCTAAGAAAATTACTAGTGATCCTTATGTGACGGTTTCAGTGGCAAATGCTGTTGTTGCAAGAACGTATGTGATTAGTAATTCTGAAAATCCTGTTTGGAAGCAACACTTCCATGTTCCTGTTGCACATAGCGCTGCTGAAGTGCACTTCGTTGTAAAGGACAGTGATGTTGTGGGCTCACAACTCATTGGAATTGTAGCAATTCCAGTTGAGCAAATATTCTCAGGTACCAAAATTGAAGGAACTTACCCTATACTAAATAATAGCCGGAAGCCATGTAAACCTGGTGCTGTTTTGACTCTTTCCATTCAATACATCCCAATTGAGAAACTGAGTATTTATCACCAAGGGGTGGGAGCTGGACCTTACTATGAAGGGGTGCCTGGCACATATTTCCCTCTTAGGAAAGGTGGAACAGTGACCTTGTACCAAGATGCCCATGTTCCTGATGGGTTTCTCCCAAACATTCAGCTTGATGATGGGATGCATTATATGCATGGTAAATGTTGGCACGACATGTTTAATGCTATACGTCAGGCACGGCGTTTGATTTATATTACAGGCTGGTCAGTGTGGCACAAAGTTATCCTGGTTCGTGATGCTGGGTCTCCATTATCATCAGAGAGCACTTTGGGCAATATCCTGAGAGCAAAGTCTCAAGAAGGAGTCAGGGTGCTCCTTCTTGTTTGGGATGACCCTACTTCGAGGAACATCCTGGGTTACAAAACTGATGGAATCATGGCAACTCATGATGAGGAAACTCGGCGCTTCTTTAAACATTCTTCTGTGCAAGTGATCCTTTGTCCCCGCATTGCTGGAAAGCGAAATAGCTGGGTCAGGCAAAGGGAAGTTGAAACAATCTATACTCATCATCAGAAAACTGTGATTGTGGATGCTGATGCTGGCAATAATAGAAGAAAAATCATAGCTTTTGTTGGAGGTCTCGACTTATGTGATGGGCGATATGATATTCCAGAACATCCTATTTTCCGTACTCTCCAAACAGTGCATAAGGATGATTATCACAATCCTACCTACACAGGTAATACTGTTGGTTGTCCACGGGAACCGTGGCATGACTTGCACTCTAAAATTGATGGTCCTGCTGCATATGATGTTCTGACAAACTTTGAGGAAAGGTGGTTAAAAGCAGCAAAACCGCATGGAATTAAAAAGTTTAAACATTCATATGATGATGCTTTGCTCAGAATTGAAAGGATTCCAGACATAGTACGGGTGAATGATGCTCCAACCATCAGTGAAAACAATCCAGAAGCATGGCATGTTCAGGTATTCCGGTCAATCGATTCAAATTCTGTTAAGGGCTTTCCAAAGGATCCAAAAGATGCCACAAGCAAGAATCTAGTTTGTGGAAAAAATGTGCTGATAGACATGAGCATCCATACAGCGTATGTGAAGGCTATTCGTGCTGCCCAACACTTCATTTATATAGAGAACCAATATTTCATTGGGTCTTCATACAATTGGAGTCAAAATAAAGTCCTAGGTGCCAATAATTTGATTCCCATGGAGATCGCACTCAAGATTGCTGAAAAGATTAGAGAAAACAAGAGATTTGCAGTATATATTGTTATTCCTATGTGGCCAGAGGGTAATCCAACTGGGGCTGCTACTCAAAGGATTCTATTTTGGCAGCATAAGACAATGCAAATGATGTACGAGACAATATATAAAGCCTTAGTGGAGGTTGGGCTTGAATCAGCTTACACACCACAAGATTATTTGAATTTCTTCTGCCTTGGAAATCGCGAGGCAACAAATATGCATCAAATTACAACCCCTCTAAACCCCGGTGCACCAAATACCCCACAAGCACTCAGTCAAAAAAGCCGACGCTTTATGATATATGTTCATTCAAAAGGCATGATTGTTGATGATGAATATGTCATTTTGGGTTCTGCAAACATCAATCAGCGCTCCATGGAGGGGACGAGAGACACTGAAATTGCAATGGGTGCTTATCAACCCAATCATACTTGGGCAAGAAGAATACACAATCCGCGCGGACAGGTGATTTACATCGGTTTCTATAATTCCTAA 3054 0.4296 MDHHGSSSSYPYQSPYAYPPPPSAYPPSNQPPYPPPPSYPYPYSSSNSFNYPYPPPPHASSASHSGHLEYTGSHSGHLDYARPPLSYSGSLDYAMPPSTHSGSSLYPNLDPAPPPPPPPATHTGCLSGLQQQSSFQYGVPHHHYEQSAPYPPPENQNPVPSHATSFTDVYRQDSISYGAMGSSQNIDNSVPSHLSGYPTLDVSMSNLHLSDNCQSAPASPPAPSLVTAQSERLYGYPNNTFTSSYSGNLGRPSPSALSYSGSFDASNHGQSTQIVPLQGKGSLKVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDVFSMLPGNVSNKIEGQMSKKITSDPYVTVSVANAVVARTYVISNSENPVWKQHFHVPVAHSAAEVHFVVKDSDVVGSQLIGIVAIPVEQIFSGTKIEGTYPILNNSRKPCKPGAVLTLSIQYIPIEKLSIYHQGVGAGPYYEGVPGTYFPLRKGGTVTLYQDAHVPDGFLPNIQLDDGMHYMHGKCWHDMFNAIRQARRLIYITGWSVWHKVILVRDAGSPLSSESTLGNILRAKSQEGVRVLLLVWDDPTSRNILGYKTDGIMATHDEETRRFFKHSSVQVILCPRIAGKRNSWVRQREVETIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDIPEHPIFRTLQTVHKDDYHNPTYTGNTVGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPHGIKKFKHSYDDALLRIERIPDIVRVNDAPTISENNPEAWHVQVFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWSQNKVLGANNLIPMEIALKIAEKIRENKRFAVYIVIPMWPEGNPTGAATQRILFWQHKTMQMMYETIYKALVEVGLESAYTPQDYLNFFCLGNREATNMHQITTPLNPGAPNTPQALSQKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPNHTWARRIHNPRGQVIYIGFYNS* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00841 1017 MobiDBLite consensus disorder prediction 91 126 - -
Pte4g00841 1017 ProSiteProfiles C2 domain profile. 269 414 IPR000008 -
Pte4g00841 1017 SMART C2_3c 291 413 IPR000008 -
Pte4g00841 1017 FunFam Phospholipase D delta 491 731 - -
Pte4g00841 1017 Gene3D Endonuclease Chain A 763 1000 - -
Pte4g00841 1017 MobiDBLite consensus disorder prediction 14 42 - -
Pte4g00841 1017 Pfam Phospholipase D Active site motif 618 652 IPR001736 GO:0003824
Pte4g00841 1017 Pfam Phospholipase D Active site motif 952 978 IPR001736 GO:0003824
Pte4g00841 1017 Pfam C2 domain 290 416 IPR000008 -
Pte4g00841 1017 SUPERFAMILY Phospholipase D/nuclease 459 716 - -
Pte4g00841 1017 SUPERFAMILY Phospholipase D/nuclease 779 987 - -
Pte4g00841 1017 FunFam Phospholipase D 765 997 - -
Pte4g00841 1017 MobiDBLite consensus disorder prediction 142 164 - -
Pte4g00841 1017 SMART pld_4 617 652 IPR001736 GO:0003824
Pte4g00841 1017 SMART pld_4 951 978 IPR001736 GO:0003824
Pte4g00841 1017 MobiDBLite consensus disorder prediction 1 76 - -
Pte4g00841 1017 Gene3D C2 domain 285 425 IPR035892 -
Pte4g00841 1017 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 617 652 IPR001736 GO:0003824
Pte4g00841 1017 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 288 439 IPR035892 -
Pte4g00841 1017 FunFam Phospholipase D delta 285 432 - -
Pte4g00841 1017 Gene3D Endonuclease Chain A 492 733 - -
Pte4g00841 1017 PANTHER PHOSPHOLIPASE D 282 1009 IPR015679 -
Pte4g00841 1017 CDD C2_plant_PLD 284 437 - -
Pte4g00841 1017 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 951 978 IPR001736 GO:0003824
Pte4g00841 1017 MobiDBLite consensus disorder prediction 108 122 - -
Pte4g00841 1017 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00841 Pte-Chr4 39511338 39519737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00841 67 1009 Phospholipase D Gene Family (Wang group) AT2G42010 69.286 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00841 K01115 - qsa:O6P43_017532 1434.85