Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00840 ATGGCTGCAATTCATAAACAAGAGCCTGACGAGGAGCAAGAACCGCCTCAACGTCCCAACTTAAACGATGTCGTACGAGAGCCCACACCAAATACCTCACCAGTGTTTTCTATGGTGAAAGAACCAAAACAAGAGGCTGGTACGATGTCGGATGCTTTACGTGTCATGCCAGTTGCAGTGAACCTGCCGACTGGGATGTCCATGAGTCGCGTGTTTCAACCATCACAACGGAAGAGGTCTTCAACTAAAGACCGCCATACCAAAGTGGAAGGACGGGGTCGTAGGATCCGAATGCCCGCCACTTGTGCTGCAAGGATCTTTCAGTTGACCCGGGAACTTGGTCACAAGTCTGACGGGGAAACAATCCAGTGGCTGCTTCAACATGCTGAATCAGCCGTCATCGCTGCCACCGGAACTGGAACGATACCAGCTATAGCTATGCCAGTGAATGGAACGCTCAAAATCCCAACTACGCCACCTTCGACCGCAAACAACTCGAAACCAGAACACGATTCCGCTGAAAGGATGAAACGAAAGAGACCGAGTAATAGCTCGTATATTGAAACAAACGAGAGCAATTCAGTTTCTACGGGTCTCGCTCCCGTTTCAACAAACACAACAGTGACAACGACGGCCATGGCGCCGATGCTTACATCAGTATCCCAGCAAGTAATTTCGCTAGCTCAAGGAGTTGTTCCCATTTGGACAAGACCTCCAAACTTAGGCGTCCCAGCTGGAACGTTGTTCATGGTTACACCTGTGGCTGCTTCCATAGCTGCCGGTCCTTCAATTCAACCACCGCTCTTAGCCATTCCTGCAGCGGCAACACCTTGGATCAGTTTACCTGCAAAACCCCTTTTAGCTTCTGTTTCTTCTATGGCAACGAGTATAGCTGCTCCATGTTCATCACTCATGGCACCAAACTCAATCTCAACATCAACCACCAGACCTCACGCTCTTAGAGACCTTTCCTTGCAGATTTGTGATAAACAAGAACTTCGACTCATGTCTCAGTCTTCAAAAAATTGA 1029 0.4888 MAAIHKQEPDEEQEPPQRPNLNDVVREPTPNTSPVFSMVKEPKQEAGTMSDALRVMPVAVNLPTGMSMSRVFQPSQRKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIQWLLQHAESAVIAATGTGTIPAIAMPVNGTLKIPTTPPSTANNSKPEHDSAERMKRKRPSNSSYIETNESNSVSTGLAPVSTNTTVTTTAMAPMLTSVSQQVISLAQGVVPIWTRPPNLGVPAGTLFMVTPVAASIAAGPSIQPPLLAIPAAATPWISLPAKPLLASVSSMATSIAAPCSSLMAPNSISTSTTRPHALRDLSLQICDKQELRLMSQSSKN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00840 342 MobiDBLite consensus disorder prediction 77 92 - -
Pte4g00840 342 MobiDBLite consensus disorder prediction 1 36 - -
Pte4g00840 342 MobiDBLite consensus disorder prediction 67 92 - -
Pte4g00840 342 MobiDBLite consensus disorder prediction 1 17 - -
Pte4g00840 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 197 IPR005333 GO:0003700
Pte4g00840 342 MobiDBLite consensus disorder prediction 168 184 - -
Pte4g00840 342 ProSiteProfiles TCP domain profile. 82 136 IPR017887 -
Pte4g00840 342 Pfam TCP family transcription factor 81 183 IPR017887 -
Pte4g00840 342 MobiDBLite consensus disorder prediction 185 201 - -
Pte4g00840 342 MobiDBLite consensus disorder prediction 153 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00840 Pte-Chr4 39509388 39511074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00840 78 333 TCP Transcription Factor Family AT2G45680 50.350 5.52e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte4g00840 TCP 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00840 - - qsa:O6P43_017533 298.901