Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00835 ATGTTCCCCGACAATGTCGTACAGTGGATCAGAGGTCCCTTGCTTGGTTTTGGAGGTTTTGGCTCAGTGTCTATGGCTTTTCTACAGAAACCCACATTAATGGAACAGCCCACCACCCCAAAGGCAGTGAAGACAACAGAGTATTTTTCTGCAGCAGAACTCATACAGGAAAAGTTGATCTTGGATGAACTTGGCAACTCAGGTTGCCCTCACCCTAACGTTATTCGAACTTACGGTGATGACATCACTATCACCGGACATGGAAACGTGTTGTACAATGTGTTCTTGGAGTTTGCTTCTGGCGGGACACTCAGTGATCTGATTAGAATCTCCAAAGGGCTGAGCGAAAGTCAAGTGAAGCACTACACTGCTTGCATTCTGAGCGGTATTGGGTATATTCACAATAAGGGTTTTGTTCACTGTGATTTGAAACCCCAGAACATCTTACTTGTGGCTCAAGGTTCTGATTTCATACCCAAGATTTGTGATTTTGGATTGTCAAAGAAGGCAAGGTCTGATGAGGGTGATGATGGTTTTGAAGTAAGAGGTACCAGAATCTATCTGTCACCTGAGGCTGTCTTCTGCAAAGTTCAACAGCAACCTTCTGATATCTGGGCATTGGGGTGTCTTGTCCTTCAGATGTTCACTGCAAGACCTCCATGGGAACTGAGAAAAGGTCCATCAGGTTTCAGAGAACTGGAAAACAAGTTGAAGAATCAAATCCCTTGCATTCCAGATTGGATATCAGAGGAGGGAAAGGATTTTCTTCACAAGTGTTTTGAGAAGAAGCCTGAAAAACGAAAAACTGCTTCAATGCTAATGAAGCATCCCTTTGTGGCTGCACACACAAAGGGATGCAAAAACAAACATGAAACAAAATTGACTACATCGTCAAGCATTTTGTTTGTATCAGAGGATGATGTTGGTGACTGTGATGATTATATTCCACTTGGTGATGATCATTGTTTGTCTTCATCGAGTTTAGGGCTTCACAAAGACTCCTCCCTCTCAGTTCCTATTTTTACAGCGTCGATGTAA 1038 0.4306 MFPDNVVQWIRGPLLGFGGFGSVSMAFLQKPTLMEQPTTPKAVKTTEYFSAAELIQEKLILDELGNSGCPHPNVIRTYGDDITITGHGNVLYNVFLEFASGGTLSDLIRISKGLSESQVKHYTACILSGIGYIHNKGFVHCDLKPQNILLVAQGSDFIPKICDFGLSKKARSDEGDDGFEVRGTRIYLSPEAVFCKVQQQPSDIWALGCLVLQMFTARPPWELRKGPSGFRELENKLKNQIPCIPDWISEEGKDFLHKCFEKKPEKRKTASMLMKHPFVAAHTKGCKNKHETKLTTSSSILFVSEDDVGDCDDYIPLGDDHCLSSSSLGLHKDSSLSVPIFTASM* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00835 345 SMART serkin_6 9 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00835 345 Pfam Protein kinase domain 14 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00835 345 SUPERFAMILY Protein kinase-like (PK-like) 9 287 IPR011009 -
Pte4g00835 345 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 9 291 - -
Pte4g00835 345 ProSiteProfiles Protein kinase domain profile. 9 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00835 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pte4g00835 345 Gene3D Transferase(Phosphotransferase) domain 1 8 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00835 Pte-Chr4 39439450 39440487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00835 7 281 MAP Kinase Kinase Kinase AT5G67080 40.357 1.62e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte4g00835 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00835 - - qsa:O6P43_017857 280.026