Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00831 ATGAAAGCCATGGTGGAAGTGGGTGGTGATGAGGTTTTGAATCACGTGTGCTCTGCTGAAGAATGGTTATCTCATGCAAATGAACTTGTGTCATTGGCTCTTCACAAGGCAAGGGAAGTAAAAGGTTTTCCTGGTAGGTGGAAGGTGATAATTTCAAAGATAGAACAGGTCCCGTCAAGTTTATACGATTTGTCAAGCCATCCTTGTTTCTCCAAGAATGCACTATGCAAGGAGCAATTGCAAGCTGTGTCAAGGACAATGAAGGAGGCTATTGAATTGGCTGAGTTATGTATACTTGAGAAGTATGAAGGTAAGCTTCGAATGCAGAGTGATCTTGATTCATTATCTGGAAAACTGGGTTTAAATTTGCGGGACTGTAGTCTACTGATCAAGACTGGGGTGCTTGGAGAGGCTACTCTGCCTTTGGCTGTATCGGATCGTTCGGCCGAGCCAGACTCAGCAGCAAATGGCAATATAAGGGAGTTGCTTGCAAGGCTTCAGATTGGACATTTGGAGGCAAAGCACAGGGCTCTTGATAGTCTGATTGTAGTTATGAGAGAAGATGAGAAGAGTGTTTTATCTGTCTTGGGGAGAAGCAATGTTGCTGCTTTGGTTCAATTGATAACAGCAACTTCTCCTTGTATACGTGACAAAGTGGTCAGTGTAATTTGCTCAATTGCAGAATCTGGGAATTGCGATAGTTGGTTAGTTTCAGAAGGTGTTCTACCGCCTCTTATCAGGCTTGTTGAGTCAGGTAGTCCTGTGTGTAAAGAGAAGTCAACAGTAGCACTTCAGAGATTGTCAATGTCTTCTGAAACAGCTCATACAATCATCGGTCACGGCGGGGCTCGTCCCTTGGTTGAACTTTGTCAGACTGGGGATTCAATATGTCAGGAGGCTGCTGCTTGTACATTGAAGAATTTATCAATGGTTCCGGAGGTACGCCAAACTTTGGCAGATGAAGGGATTGTTAGAGTTATGATTAATCTGCTAACTTGTGCCATTTTGGTGGGGTCGAAAGAGTATGCTGCAGAGTGCCTGCAGAATCTCACTGCAAGCAATGATAATCTCAGAAGGTTGGTAATATCAGAGGGCGGTATCTGCAGTCTGCTAGCCTACCTTGATGGACCACTACCCCAAGAATCTGCCGTTGGAGCATTAAGGAATTTGGTTGGATTGGTTCCTGTCCAAAAGTTGGTTTCTCATGGTCTTCTTCCCAGATTGGTTCATGTGCTTAAATCAGGATCATCGGGTGCGCAACAAACCGCAGCCTCTGCGATTTGTCGGATATGCAGCTCTGCAGAGATCAAGATGATGGTTGGTGAAGCTGGGTGCATCCCTCCTCTTGTCAAGATGCTCGAGGCTAAATCAAACAGCGCAAGAGAAATTTCTGCACAAGCAATCTCCAGCTTAATTTCAGTATCTCAGAATTGCAGAGAAGTGAAGAAGAACGACATAAGCGTGCCAAATCTGGTTCAATTGCTTGACCCATGTCCACAGAATACTGCAAAGAAATATGCAGTTTCCTGCCTTTCATCTCTTTCTTCCAGTAAAAAGTGCAAGAAGCTTATGATTTCGTATGGAGCAATAGGATATCTCAAGAAACTTGCAGAGATGGATGTCCCTGGATCTAAGAAGCTGCTTGAGCGATTGGAAAGAGGGAAATTGAGAAGTTTCTTCAGCAGGAAGTAG 1692 0.4433 MKAMVEVGGDEVLNHVCSAEEWLSHANELVSLALHKAREVKGFPGRWKVIISKIEQVPSSLYDLSSHPCFSKNALCKEQLQAVSRTMKEAIELAELCILEKYEGKLRMQSDLDSLSGKLGLNLRDCSLLIKTGVLGEATLPLAVSDRSAEPDSAANGNIRELLARLQIGHLEAKHRALDSLIVVMREDEKSVLSVLGRSNVAALVQLITATSPCIRDKVVSVICSIAESGNCDSWLVSEGVLPPLIRLVESGSPVCKEKSTVALQRLSMSSETAHTIIGHGGARPLVELCQTGDSICQEAAACTLKNLSMVPEVRQTLADEGIVRVMINLLTCAILVGSKEYAAECLQNLTASNDNLRRLVISEGGICSLLAYLDGPLPQESAVGALRNLVGLVPVQKLVSHGLLPRLVHVLKSGSSGAQQTAASAICRICSSAEIKMMVGEAGCIPPLVKMLEAKSNSAREISAQAISSLISVSQNCREVKKNDISVPNLVQLLDPCPQNTAKKYAVSCLSSLSSSKKCKKLMISYGAIGYLKKLAEMDVPGSKKLLERLERGKLRSFFSRK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00831 563 Gene3D - 338 396 IPR011989 -
Pte4g00831 563 Pfam Armadillo/beta-catenin-like repeat 271 309 IPR000225 GO:0005515
Pte4g00831 563 Pfam Armadillo/beta-catenin-like repeat 396 432 IPR000225 GO:0005515
Pte4g00831 563 Pfam Armadillo/beta-catenin-like repeat 435 471 IPR000225 GO:0005515
Pte4g00831 563 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 240 282 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 395 432 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 311 352 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 474 516 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 229 269 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 353 392 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 270 310 IPR000225 GO:0005515
Pte4g00831 563 SMART arm_5 433 473 IPR000225 GO:0005515
Pte4g00831 563 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 561 - -
Pte4g00831 563 SUPERFAMILY ARM repeat 156 541 IPR016024 -
Pte4g00831 563 Gene3D - 397 550 IPR011989 -
Pte4g00831 563 Gene3D - 155 337 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00831 Pte-Chr4 39408115 39410704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00831 403 541 U-box Gene Family AT3G54790 29.496 1.32e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00831 4 39408115 39410704 Pte4g00831 4 39408115 39410704 RCT