Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00787 ATGGTAATGGAGGTTCAGTCTAAGAAACCTTCTTCACTCCCTACCCAGCAGCAGCTGGAGACCATGGGATCCTCCCCTCCACCTAGTCCACTCCTAAAGTTGATCCTTGTAGCATCCATTGCTGCTGGGATTCAATTCGGTTGGGCACTCCAACTCTCATTGCTTACCCCTTATGTTCAACTTCTCGGTATCCCTCATAAATGGGCTGCCTTCATTTGGCTGTGCGGTCCTATCTCTGGTATGCTTGTTCAACCTATTGTTGGTTTCCATTCCGACCATTGCACCTCCCGTTTTGGTCGTCGTCGTCCTTTCATAGCAGCAGGCGCTGCATGTGTGGCTGTCGCGGTGTTCCTCATCGGCTATGCCGCTGACATCGGTCACAAGGCCGGTGATTCCTTAGAGAAAACTAGTAAACCCCGTGCCATAGCAGTGTTTGTTGTAGGTTTTTGGATTCTTGATGTTGCTAACAACATGTTACAAGGTCCATGTCGTGCTCTTCTAGCTGATCTATCAGCAAACAATGCTAAGAAAACCCGAACAGCCAATGCATTCTTCTCATTCTTTATGGCTGTTGGCAACGTACTTGGCTACGCTGCCGGTTCGTTCAAACACTTGTATAAAGTTTTCCCATTTACAAAAACAAAAGCATGTGACGTTTACTGTGCAAACCTGAAGAGTTGTTTCTTTATCTCTATTGCGTTGCTTGCTACAGTCACTGTAATAGCTCTCTTCTTTGTTAGAGAGAGAAAATGGTCACCAGATGAGAAGGGTGACCAAGAAGAGGAAGAACAAAGTGGTGGAGGAAGTTGTAGGGTACCCTTTTTCGGTGAGATCATAAGTGCCTTGAAAGAAACCAAAAAACCCATGTGGATTCTACTATTAGCGACATGCTTGAACTGGATAGCTTGGTTTCCATTCTTGTTGTTCGATACAGATTGGATGGGCAGGGAGGTATACGGAGGCAAAGTTGGTGGCACAAGTTCTGAAGAGAATTTGTATAACGTGGGAGTACGTGCTGGTGCGTTAGGATTGATGTTGAACTCTGTGGTGTTGGGGGTGATGTCTTTGGGGGTAGAGGTGTTGGGGCGTTGGGTGGGTGGTGTGAAGAGGTTGTGGGGTATAGTGAATATCTTATTGGCTATTTGTATGGCAATGACGGTGTTGGTTACCAAGCTGGCCGCCTCGTCACGGCACTATGAAGCTGGCAGCAACGGCACACAGCAGCTGTTGCCACCACCTGAAGGTGTGAAAGCCGGCGCCTTGGCATTGTTTGCAGTGTTGGGAGTCCCTCTTGCAATAACATACAGCATCCCTTTTGCACTAGCATCTATCTTTTGCAGCAATGCTGGTGCAGGTCAAGGGCTTTCTCTGGCAGTGTTAAATCTTTCTATTGTCATACCACAGATGGTTGTGTCTGTTGTTAGTGGTCCGTGGGATGCTTTATTTGGCGGCGGTAACCTACCGGCTTTCGTTGTGGGAGCCGTGGCGGCAGCAGCTAGTGCAATTATTGCATTGTTTATGCTGCCATCTCCACCTCCAGACGTTCCAGCATCTAAAACTGGGCCAGTCATGGCTTTTCATTAG 1584 0.4773 MVMEVQSKKPSSLPTQQQLETMGSSPPPSPLLKLILVASIAAGIQFGWALQLSLLTPYVQLLGIPHKWAAFIWLCGPISGMLVQPIVGFHSDHCTSRFGRRRPFIAAGAACVAVAVFLIGYAADIGHKAGDSLEKTSKPRAIAVFVVGFWILDVANNMLQGPCRALLADLSANNAKKTRTANAFFSFFMAVGNVLGYAAGSFKHLYKVFPFTKTKACDVYCANLKSCFFISIALLATVTVIALFFVRERKWSPDEKGDQEEEEQSGGGSCRVPFFGEIISALKETKKPMWILLLATCLNWIAWFPFLLFDTDWMGREVYGGKVGGTSSEENLYNVGVRAGALGLMLNSVVLGVMSLGVEVLGRWVGGVKRLWGIVNILLAICMAMTVLVTKLAASSRHYEAGSNGTQQLLPPPEGVKAGALALFAVLGVPLAITYSIPFALASIFCSNAGAGQGLSLAVLNLSIVIPQMVVSVVSGPWDALFGGGNLPAFVVGAVAAAASAIIALFMLPSPPPDVPASKTGPVMAFH* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00787 527 PANTHER SUGAR TRANSPORTER 31 507 - -
Pte4g00787 527 MobiDBLite consensus disorder prediction 8 25 - -
Pte4g00787 527 MobiDBLite consensus disorder prediction 1 26 - -
Pte4g00787 527 Pfam MFS/sugar transport protein 42 265 - -
Pte4g00787 527 SUPERFAMILY MFS general substrate transporter 34 512 IPR036259 -
Pte4g00787 527 CDD MFS_SLC45_SUC 34 487 - -
Pte4g00787 527 NCBIfam sucrose/proton symporter 30 513 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pte4g00787 527 Gene3D MFS general substrate transporter like domains 32 508 IPR036259 -
Pte4g00787 527 FunFam Sucrose transport protein 28 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00787 Pte-Chr4 38910529 38913826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00787 3 528 Sucrose Transporter Gene Family AT1G22710 67.992 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00787 K15378 - pop:7467435 753.051