Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00785 ATGCTGCGGGGGAACTCTGGTTTACCGGAACATTCTGGTGCTTGTATTCCAACCCCGGAAATCAATGGCGAAGGTAATGGTGATGCGGCTGACCAGGCTTCAATTGGATTTGCAGAGGAAGAAGAGAGAGCTGGGGATGGACCCACGTGGACTGCCAATCGTTGGCCTCGTGAGGAGACGCTGGCTTTGCTGAAGATAAGGTCCGAAATGGATACTGCTTTCAGAGATGCTACCCTTAAAGCTCCTCTTTGGGAACAGGTTGTCAAGGTCAGTTTTTTTAATTACTACTGTTATTTTTTCTGA 303 0.4818 MLRGNSGLPEHSGACIPTPEINGEGNGDAADQASIGFAEEEERAGDGPTWTANRWPREETLALLKIRSEMDTAFRDATLKAPLWEQVVKVSFFNYYCYFF* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00785 100 Gene3D - 55 90 - -
Pte4g00785 100 PANTHER FI21293P1 25 88 - -
Pte4g00785 100 MobiDBLite consensus disorder prediction 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00785 Pte-Chr4 38857974 38858276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00785 53 89 Trihelix Transcription Factor Family AT1G33240 81.081 3.36e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte4g00785 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00785 - - qsa:O6P43_023330 86.2705