Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00784 ATGTTGATGAAGCAAGTTGTCGAGAAGCAAGAGAATCTACAGAAGGAATTCTTGGAGGTGTTAGAAAAATGCGAACGAGATCGAATGGCTAGAGAAGAAGCTTGGAAAAGTCAAGAATTGGCACGGATTAAGAGGGAGGGGGAGCTTCTGGCTCAGGAAAGATCAATTGCTGCTGCAAAGGATGCAGCTGTGCTTGCTCTTCTAAAGCAATTTACAGGACAAGAAGGGCGTCAGCAATTACCCGAGAATATTCAGGTTCAGAATCTTGTTCCACAAGGGAATGAGAAGGAGAAAGAAAACGGTGATAGTGGCAACATAATTGATAAGCAGCAAGAAACAAACCGTGGTGGGTTTTCATTGCAGTTGAGCTCATCAAGGTGGCCAAAAGCTGAGGTGGATGCTTTGATTAGTCTGAGGACTAACCTTGATATGCATTACCAAGAGAATGGATCTAAAGGGCCGTTGTGGGAAGATATATCCTCTGCAATGAAAAGGCTTGGTTATGATCGCAATGCAAAGAGATGCAAAGAAAAATGGGAAAACATAAACAAGTACTTTAAAAAGATGAAAGAAAGGAATAAGAGAAGGCCTGAAGATTCTAAACTTGTCCTTATTTTCTGCAACTTGAGGCCTTATACAGTAAAAAACCCAAAATGGTTGCTGATTCTACTGGTTCTGCCAATGACACGAAGGCTGAGGAGCTCTTGCTGCCTATAA 717 0.4198 MLMKQVVEKQENLQKEFLEVLEKCERDRMAREEAWKSQELARIKREGELLAQERSIAAAKDAAVLALLKQFTGQEGRQQLPENIQVQNLVPQGNEKEKENGDSGNIIDKQQETNRGGFSLQLSSSRWPKAEVDALISLRTNLDMHYQENGSKGPLWEDISSAMKRLGYDRNAKRCKEKWENINKYFKKMKERNKRRPEDSKLVLIFCNLRPYTVKNPKWLLILLVLPMTRRLRSSCCL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00784 238 Gene3D - 127 188 - -
Pte4g00784 238 ProSiteProfiles Myb-like domain profile. 119 183 IPR001005 -
Pte4g00784 238 Pfam Myb/SANT-like DNA-binding domain 125 201 IPR044822 -
Pte4g00784 238 Coils Coil 7 27 - -
Pte4g00784 238 PANTHER FI21293P1 2 210 - -
Pte4g00784 238 SUPERFAMILY Homeodomain-like 125 185 IPR009057 -
Pte4g00784 238 MobiDBLite consensus disorder prediction 89 113 - -
Pte4g00784 238 CDD GT1 125 190 - -
Pte4g00784 238 FunFam Trihelix transcription factor GT-2 127 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00784 Pte-Chr4 38856581 38857297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00784 2 228 Trihelix Transcription Factor Family AT1G76890 46.862 7.77e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte4g00784 Myb_DNA-bind_4 2.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00784 - - qsa:O6P43_023330 265.388