Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00764 ATGGCTTCTCCTGCCACTGCCATCATCACCGTGTTCCTCCTGCTAACCATGTTTATCACCAATATCTCTTGCCAACATGAACTGGTGGTTCTTCAAATGGCGAAAGACCATGTTTTGCAGGCCAAAAATTGGATAACGGACTCGGCAGCACTGAGTTATAACTCTGAACACAGCGCAGATTCTGCTGGCGTAGCTCTAAGTGACTGCATTAAGCTATATGATGAAAGCAATGACACACTAGCGCACATGCTTGCTGAGAACAGTGCCTATACTGGCCACGATGCTCGTACATGGCTCTCTGCTATCTTGACAAACCATAGAACTTGTCTGGAAGGTTTAGAGCAAAAGGCTTACGCTAATGTTCAACAAGTGGGACACAGACTCAGTAAGGTGCTTGATCAAGCTCTTGCTGTGTACCAAAAAAGCAAGGGCAAGGGACAAGGATTTTCGGACCCCAATGAAGGCCTTTTGGGGTCATGGAACCCATCAATTTCAAAGGCACACTTGACAGTAGCACAAGATGGTTCAGGAAGACACAAAACGATCAAAGAAGCATTGTCTGCCCTCTCTGCAATGCGTCAAAACCGTCCTCAGAGAGCAATTATCTACGTGAAAGCCGGAGTATACAATGAGAAAGTGGTCATTGAAAGGTCCTTGAAAAACGTGATGTTAATCGGTGACGGCATGGACAGAACAATCATCACTGGCAGGCGAAATCGAATTGATGGCGCTACAACTTTGAGCTCTGCTACCTTTGATGTTTCAGGAGATGGCTTTTGGGCTAGGGACATTACATTTGAGAACACAGCTGGTCCTCAAAAGGAACAAGCTGTGGCGCTGAGGGCAGGCTCAGACCTGTCTGTATTTTACAGATGCAGCTTCAAAGCATACCAGGACACTCTATACGTTCATTCAAATCGACAGTTTTTTCGAGATTGTCACATATACGGCACAATTGATTTCATATTTGGTAATTCAGCAGTGGTGTTCCAAAATTGTGATATCTTTGTGAGGAAGCCAATGGCCAAACAATCTAACTTCATCACAGCACAAGGAAGAGAGAATCCAAATGAGAACACTGGAATTACAATTCAGTACAGCCGAGTTAGGCCTGCCGCAGACTTTGTTTCAGCCTCTAGACAAGTCAAGAGCTACTTAGGTAGACCCTGGAAACAATATTCCAGGACTGTGTTTTTGAAGACAGACCTGGATGGTTTGATTCATCCAAAAGGGTGGTCAGAGTGGAATGGAAATTTTGCACTTTCAACTCTTTATTATGGGGAGTATTTGAACGCTGGAAGAGGTGCCTCAACTGGTAATAGAGTAACATGGCGTGGTTTTCATGTGCTGCATAACCCTGCAGAGGCCAGTCCCTTCACAGTTAACAAGTTTATACAAGGAGATTCATGGGTTCCTGCAACTGGGGTGCCATTTCAGGCAGGAATTTAA 1449 0.4486 MASPATAIITVFLLLTMFITNISCQHELVVLQMAKDHVLQAKNWITDSAALSYNSEHSADSAGVALSDCIKLYDESNDTLAHMLAENSAYTGHDARTWLSAILTNHRTCLEGLEQKAYANVQQVGHRLSKVLDQALAVYQKSKGKGQGFSDPNEGLLGSWNPSISKAHLTVAQDGSGRHKTIKEALSALSAMRQNRPQRAIIYVKAGVYNEKVVIERSLKNVMLIGDGMDRTIITGRRNRIDGATTLSSATFDVSGDGFWARDITFENTAGPQKEQAVALRAGSDLSVFYRCSFKAYQDTLYVHSNRQFFRDCHIYGTIDFIFGNSAVVFQNCDIFVRKPMAKQSNFITAQGRENPNENTGITIQYSRVRPAADFVSASRQVKSYLGRPWKQYSRTVFLKTDLDGLIHPKGWSEWNGNFALSTLYYGEYLNAGRGASTGNRVTWRGFHVLHNPAEASPFTVNKFIQGDSWVPATGVPFQAGI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00764 482 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 116 IPR035513 -
Pte4g00764 482 Pfam Pectinesterase 169 468 IPR000070 GO:0030599|GO:0042545
Pte4g00764 482 NCBIfam pectinesterase inhibitor domain 31 138 IPR006501 GO:0004857
Pte4g00764 482 Pfam Plant invertase/pectin methylesterase inhibitor 29 137 IPR006501 GO:0004857
Pte4g00764 482 Gene3D - 163 482 IPR012334 -
Pte4g00764 482 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 141 IPR035513 -
Pte4g00764 482 SMART PMEI_2 14 138 IPR006501 GO:0004857
Pte4g00764 482 FunFam Pectinesterase 163 482 - -
Pte4g00764 482 SUPERFAMILY Pectin lyase-like 163 481 IPR011050 -
Pte4g00764 482 CDD PMEI-like_4 8 142 - -
Pte4g00764 482 PANTHER PECTINESTERASE 35 472 - -
Pte4g00764 482 ProSitePatterns Pectinesterase signature 2. 315 324 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00764 Pte-Chr4 38617676 38619437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00764 6 483 Carbohydrate Esterase AT3G60730 55.361 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00764 K01051 - gmx:100792852 623.624