Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00763 ATGAAGAATTTTCATATTGTCATTGCTCTTTTCATTGCATCACTACTTCCTTCCAATGCTTTTGCATATTCATTCAATGATGCAAAACTATGGTGTGCTAAAACCCCCAACCCTCAACCATGTGAGTACTCCTTGACCTCCAACCCTAGTCCTATCCCCATCAAGCAAAATTCTGATTTCTTTAAGATAATGACAAGACATGCTTTAGAGGGAGCATGTAAAGCTCATACCACAGCATTCTCACTAGGCCCAAAGTGCAAAACTTCACATGAAACAGCTGCATGGTCGGATTGCCTTCAACTCTTTCAAGACGCTATTGCTATGCTCAACAAAACCTTAAACCCCACCGCCAAATGCACCCAAACTGATGTTCAAACATGGCTAAGCACAGCCCTCACTAACCTTGAGACATGCAAGGATGGGTTTAATGATCTTGGGGTTACAAATAGTGTATTGCCTTACATGATGTCAAATAATGTTTCCAAGATGATTAGCAATTCTCTGGCTGTCAACTACGTTCCACATAGCGAACCAAGTTATAACAACGACGGATTCCCACCATGGGTTAAACCGGGTGACCGGAAACTCTTGCAGTCTTCTTCACCAGCTTCTCAGGCAAATATTGTGGTGGCTGCTGATGGTTCAGGTAGCTATACAACATTGAAGGCTGCAATAAATGCTGCATCCAAACGTTCAGGGAGTGGGAGGTTTGTGATATATGTTAAAGCAGGTACATATCAAGAAAATGTTGAGATAAACTTGAAGAACATTATGTTGGTGGGAGATGGCATTGGCAAGACCATTATCACAGGCAGCAGAAGTGTTGGAGGGGGTTCGACGACATATGCCTCAGCAACAGTTGCTGTTACTGGTGATGGATTTATTGCTAGGGACATCACATTTAGAAACACAGCTGGACCCTCAAATCACCAAGCTGTGGCCTTGCGCTCAGGATCAGACTTATCGGTATTCTATAGATGTGGCTTTGAGGGTTATCAAGACACTTTATATGTGTACACTCAGAGACAGTTCTATAGAGAATGTGACATATATGGCACAGTGGACTTTATTTTTGGCAACGCTGCAGTTGTTTTACAAAACTGCAATATCTATGCAAGGAGACCTCCTAACAAGACCAACACTCTCACAGCTCAAGGACGCACTGACCCTAATCAAAATACTGGAATTTCCATACATAATTCTAGGGTTACAGCTGCATCTGATTTGAAACCAGTTCAGAGTTCAGTGAGAACGTACCTGGGAAGGCCATGGAAGCAATATTCTAGGACTGTTTTCATGAAGACATTTCTGGATGGCTTCATTGATCCAGCTGGTTGGATGCCATGGAGTGGTAATTTTGCTTTGAATACTCTTTATTATGGGGAGTATATGAACAATGGACCTGGGTCATCTACAGCCACAAGAGTCAACTGGAGAGGGTACCATGTCATCACCAGTGCCACAGAGGCTTCCAGATTCACGGTGGGTAGTCTGATTGCCGGCAATTCATGGTTACCGTCGACGAATGTTCCATTCACTGCTGGCTTATAA 1551 0.432 MKNFHIVIALFIASLLPSNAFAYSFNDAKLWCAKTPNPQPCEYSLTSNPSPIPIKQNSDFFKIMTRHALEGACKAHTTAFSLGPKCKTSHETAAWSDCLQLFQDAIAMLNKTLNPTAKCTQTDVQTWLSTALTNLETCKDGFNDLGVTNSVLPYMMSNNVSKMISNSLAVNYVPHSEPSYNNDGFPPWVKPGDRKLLQSSSPASQANIVVAADGSGSYTTLKAAINAASKRSGSGRFVIYVKAGTYQENVEINLKNIMLVGDGIGKTIITGSRSVGGGSTTYASATVAVTGDGFIARDITFRNTAGPSNHQAVALRSGSDLSVFYRCGFEGYQDTLYVYTQRQFYRECDIYGTVDFIFGNAAVVLQNCNIYARRPPNKTNTLTAQGRTDPNQNTGISIHNSRVTAASDLKPVQSSVRTYLGRPWKQYSRTVFMKTFLDGFIDPAGWMPWSGNFALNTLYYGEYMNNGPGSSTATRVNWRGYHVITSATEASRFTVGSLIAGNSWLPSTNVPFTAGL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00763 516 Gene3D - 202 516 IPR012334 -
Pte4g00763 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 173 IPR035513 -
Pte4g00763 516 SMART PMEI_2 23 170 IPR006501 GO:0004857
Pte4g00763 516 FunFam Pectinesterase 201 516 - -
Pte4g00763 516 NCBIfam pectinesterase inhibitor domain 4 173 IPR006501 GO:0004857
Pte4g00763 516 Pfam Pectinesterase 207 502 IPR000070 GO:0030599|GO:0042545
Pte4g00763 516 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Pte4g00763 516 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Pte4g00763 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 171 IPR035513 -
Pte4g00763 516 PANTHER PECTINESTERASE 15 508 - -
Pte4g00763 516 Pfam Plant invertase/pectin methylesterase inhibitor 30 169 IPR006501 GO:0004857
Pte4g00763 516 SUPERFAMILY Pectin lyase-like 201 515 IPR011050 -
Pte4g00763 516 CDD PMEI-like_3 30 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00763 Pte-Chr4 38595379 38598444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00763 5 517 Carbohydrate Esterase AT2G45220 64.717 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00763 K01051 - cave:132181084 752.666