Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00761 ATGTCGGCCTCATCTACTACTTTTCCTCCGGATCATCACCTCTCTCCCTCCGAACAGCTCTGCTATGTCCATTGCAACTACTGTGACACTGTCCTCGCAGTAAGTGTTCCTTGCACTAGCTTGTTCAAGACTGTCACTGTGCGATGTGGCCACTGCTCCAACTTGTTGTCTGTCAACATGCGAGGGCTACTTCTCCCAGCTGCTAACCAGCTTCATCTTGGCCATTCTTTCTTCACTCCTCAGAATCTCTTGGAGGAGATTCGAAATGCATCATCATCATCATCAAATATGCTTATGAATCAGCTGCCAATTCCAAATGATCCACTTCTGCCAGTTCGTGGAGGCCTAGTACCTGAAGAGATCACTAGATCTTCGGTTGCAAACAAACCTCCAGAGAAGAGACAGAGAGTCCCATCCGCGTACAACCGCTTCATTAAGGATGAGATCCAACGTATCAAAGCTGGCAATCCTGATATAAGTCACAGAGAGGCCTTCAGTGCAGCTGCAAAGAATTGGGCCCACTTCCCACACATTCATTTCGGACTTATGCCTGACCATCAACCCGTGAAGAAACCTAATCTGCGCCAGGAAGGAGAGGACGTGCTTATGAAAGATGGGTTTTTCACACCTGCTGCAGCAAATGTGGGTGTCTCTCCTTACTAG 663 0.4811 MSASSTTFPPDHHLSPSEQLCYVHCNYCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGLLLPAANQLHLGHSFFTPQNLLEEIRNASSSSSNMLMNQLPIPNDPLLPVRGGLVPEEITRSSVANKPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKPNLRQEGEDVLMKDGFFTPAAANVGVSPY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00761 220 CDD HMG-box_SF 136 172 - -
Pte4g00761 220 PANTHER PROTEIN YABBY 6-RELATED 1 192 IPR006780 GO:0007275
Pte4g00761 220 Pfam YABBY protein 16 182 IPR006780 GO:0007275
Pte4g00761 220 Gene3D High mobility group box domain 122 177 IPR036910 -
Pte4g00761 220 FunFam Axial regulator YABBY 127 199 - -
Pte4g00761 220 SUPERFAMILY HMG-box 124 176 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00761 Pte-Chr4 38551445 38553839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00761 28 218 C2C2-YABBY Transcription Factor Family AT4G00180 60.577 6.09e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte4g00761 YABBY 1.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00761 K25796 - gmx:100781267 369.392