Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00759 ATGGCAGATCTATCCTTTCCACTACAGCCGGTAGGTTTCAGATTTGCACCAACTGATCAAGAACTCATACTTAATTTTTTACACAACAAGGTGACTGGAAAGCAGCTGTTCACCAATTGGACAGTCATGTACTACAATCTTTATGGTGATATGAGTCCCTCTCAAATATGGGAATTAGCTTTTGGAAATGGGTTAAACTTCGCACAAGATGACGTTGATGCTTACTTCTTCACCAATTTAATGAAGGTCAACCCTGGTGGCCAATGGTTCATACGCAAAGTTGGGACCTGTCATGGCATTTTTGATGATCAGCTGGAAGTCGACATTGATTCACTTATTGACTTGGACAATATATAA 357 0.4006 MADLSFPLQPVGFRFAPTDQELILNFLHNKVTGKQLFTNWTVMYYNLYGDMSPSQIWELAFGNGLNFAQDDVDAYFFTNLMKVNPGGQWFIRKVGTCHGIFDDQLEVDIDSLIDLDNI* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00759 118 Gene3D NAC domain 18 104 IPR036093 GO:0003677|GO:0006355
Pte4g00759 118 Pfam No apical meristem (NAM) protein 10 92 IPR003441 GO:0003677|GO:0006355
Pte4g00759 118 SUPERFAMILY NAC domain 6 95 IPR036093 GO:0003677|GO:0006355
Pte4g00759 118 ProSiteProfiles NAC domain profile. 9 118 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00759 Pte-Chr4 38503125 38503959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00759 5 87 NAC Transcription Factor Family AT1G62700 34.524 9.22e-06 41.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte4g00759 NAM 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00759 - - qsu:112019068 66.2402