Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00755 ATGGACTGTGATGACCTTGTAGCGTTTACTTCACAGACTTTGCGAGAAATGACCAACAATTTTGATGAGAAGAACCTTATTGGGTTGACAGAGTTTGGAAGAATCTTTAGAGGAACGATTGAAGCAGGTGTGATGCATGAAAGAACTCAACACGTATCAGTGAAGATATGGGATGATAGATTGAAATTCATGACTGTAAAACATGGTGACGAGTTTCTGATGATTAAGGAGGAAATGAAATTTTTGGCAAATCAAACAATGATCGATGTTCATCCCAACTTGGTGAAATTGGTTGGTTATTGTTGTGAAGAGGATGTGATGGGGGTTGTGTACAACATTCATCCACTGGGAACTTTACATGACATTATAGCCAAAGATGCTCTCAGTTGGTGGCAAAGAGTCAAAGTGATTTATGAGCTTGCTATACTTTTGGAATTCCTTCATCACAATCTACAGAATTCACAAGTGATATTAAATCTTAGCACATCTCATATATTACTTGATTCTGACTACCAGCCAAAAGTGTTTGATTTCATGCTGCTCAGCAAAATGAAAATGCTAGTGCACAACAGGCCAAAGTCTAAGAGCTGTATTGATCCCTATTTCTCTCTCAAGGGTTATGAATGGGATAGAAGCACTGAAATATTTTCGTTTGGAGTCATTGTGCTAGAGCTAATGTCAAAACATATGGTGACAAGAGAAGATTCAGACAAAAGTGTTGTGGACAATCTTGTGCATATTTGGGCCAAGAATGCGTACAAACCAAAGTGTTCTCTTGTACACAAGAGTTTGCAGGAAGACTGGGATTATCATAGTGAAGATGGCATCACAATCACTGAGCTGGCCATGAAATGTATAGAATTCTACCCATTTAACCGCCCCACCATGAAGGAGGTTCTAAGTTGTTTACAGGGCCTGATGATCTTTCGCCATTGGGATGATGATGCAAGACCGACAAAGAGAGACAGGAGAATGATATGA 981 0.3935 MDCDDLVAFTSQTLREMTNNFDEKNLIGLTEFGRIFRGTIEAGVMHERTQHVSVKIWDDRLKFMTVKHGDEFLMIKEEMKFLANQTMIDVHPNLVKLVGYCCEEDVMGVVYNIHPLGTLHDIIAKDALSWWQRVKVIYELAILLEFLHHNLQNSQVILNLSTSHILLDSDYQPKVFDFMLLSKMKMLVHNRPKSKSCIDPYFSLKGYEWDRSTEIFSFGVIVLELMSKHMVTREDSDKSVVDNLVHIWAKNAYKPKCSLVHKSLQEDWDYHSEDGITITELAMKCIEFYPFNRPTMKEVLSCLQGLMIFRHWDDDARPTKRDRRMI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00755 326 PIRSF ILK 7 317 - -
Pte4g00755 326 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Pte4g00755 326 Pfam Protein tyrosine and serine/threonine kinase 25 301 IPR001245 GO:0004672|GO:0006468
Pte4g00755 326 Gene3D Transferase(Phosphotransferase) domain 1 115 317 - -
Pte4g00755 326 Gene3D Phosphorylase Kinase; domain 1 2 112 - -
Pte4g00755 326 PANTHER OS01G0588500 PROTEIN-RELATED 6 305 - -
Pte4g00755 326 ProSiteProfiles Protein kinase domain profile. 21 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00755 Pte-Chr4 38473144 38474996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00755 7 308 Receptor kinase-like Gene Family AT2G28990 27.244 3.43e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte4g00755 PK_Tyr_Ser-Thr 2.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00755 - - qsa:O6P43_027021 358.607