Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00737 ATGTTGGACTACGAATGGGGCAACCCATCAACCATAATGTTCACTGGAAACGAAGAACATGAGCCTGTAAACCATGAAGACTCAGATCAAACTCACTCACAGTTATTCCAGCACTATGCTTCACAATCAAACCCCATATTTCCAGACCATTTCCTCTCTCATAATCAACTTTCATCAAACTCGGACATGTCTAACAATTTCTCTCACCATCATCCTCATCGCTATCACCACCTTAACCAGCAAGCTCACAACACACTCCAGCATTCTCTCTTTGATCCACGCGCCTTCACCTGCGCATCTTCTGCATCTTACCCTCCACCATCGCTGCCACAAACCCCACAACCTCACAACTCTTTCCTCTCCGTAGACCCACTTCTTGTGGTTCCTAAAGCTGAAGACTTTACAGCTAATAACAACAATACCAGACTTGGTCTCAACTTAGGAGGCCGTACTTATTTCTCCACCGACGATGACTTTGTCAATCGTCTCTACCGTCGGTCTACCGGTTCATCTTCTTTGTCAAACTCACCCAAGTGCCAAGCTGAAGGTTGCATTGCCGATCTATCTAACGCTAAACACTACCATAAACGGCACAAAGTCTGTGAGTTTCACTCGAAGGCTGCCACTGTGATTGCTGCCGGGTTAACTCAGCGATTTTGCCAACAGTGTAGCAGATTCCATGTTCTTTCAGAGTTTGACAATGGGAAACGAAGCTGCAGAAAGAGGCTTGCAGACCATAATCGTAGAAGGCGAAAAAACCAGCAACCAAGCCAAGAAAATCAGAAAACTCAAGACGATTCTGCTTCAAATAATTTCTCAAGGTCTCCATCAGATTCAGCTGGAGCTTACTCGTCATCGTCGGTGACGGTAGCGGTTTCTCCACCGGATTATTTCCATCAAAGGTCATATCAAAACACAAGTTCTTCAACAAGGACAAGCTCACCATTTTTCTCTAGTGGTGGCTCAAAATGA 972 0.4516 MLDYEWGNPSTIMFTGNEEHEPVNHEDSDQTHSQLFQHYASQSNPIFPDHFLSHNQLSSNSDMSNNFSHHHPHRYHHLNQQAHNTLQHSLFDPRAFTCASSASYPPPSLPQTPQPHNSFLSVDPLLVVPKAEDFTANNNNTRLGLNLGGRTYFSTDDDFVNRLYRRSTGSSSLSNSPKCQAEGCIADLSNAKHYHKRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHVLSEFDNGKRSCRKRLADHNRRRRKNQQPSQENQKTQDDSASNNFSRSPSDSAGAYSSSSVTVAVSPPDYFHQRSYQNTSSSTRTSSPFFSSGGSK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00737 323 FunFam Squamosa promoter-binding-like protein 14 170 240 - -
Pte4g00737 323 Pfam SBP domain 179 252 IPR004333 GO:0003677
Pte4g00737 323 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Pte4g00737 323 MobiDBLite consensus disorder prediction 257 323 - -
Pte4g00737 323 Gene3D - 169 240 IPR036893 GO:0003677|GO:0005634
Pte4g00737 323 MobiDBLite consensus disorder prediction 243 323 - -
Pte4g00737 323 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 83 310 IPR044817 GO:0003677
Pte4g00737 323 SUPERFAMILY SBT domain 177 257 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00737 Pte-Chr4 38243923 38246710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00737 1 226 SBP-box Gene Family AT1G02065 44.231 5.14e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte4g00737 SBP 1.5e-30 No_clan