Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00734 ATGGCTATCCCTATCTCAACCAAGGCCTTGGGCTGCTTCCTCTTCTTCTCCTTCTTTGTGATCTCTTCGTTCTCCACCTTCTCTCTTGCTCTTACAGACGCTGAAGCCTCCCTCATTGCTAGCACACAGCGTCGTTCATTGACAGATAACAAAGGTGTGCTTCCACCAAATTATGAACATGAGGTTGATATTAAGGAAACTTTCCCTAATGGAAGGCTCCGTAGAGCTTACATTGCTCTTCAAGCATGGAAGAAAGCAATCTATTCTGACCCTAAGAATATGACTGGCAATTGGGTTGGTGCAAATGTTTGTGATTACCATGGTGTCTTCTGCACTCAAGCTCTTGATGATCCCAAGCTGATGGTGGTTGCTGGTGTTGATCTCAACCATGGTGACATTGCTGGATATCTTCCTGTTGAGTTAGGGCTCTTGACTGATGTAGCATTGTTCCACTTGAACTCGAACAGGTTTTGTGGCATTGTCCCAAAAAGCTTGTCAAACCTTACCCTCATGCATGAATTTGATATCAGCAACAATCGTTTTGTGGGTCCTTTCCCTTACGTTGTTCTCGAATGGCCAAGGGTTAAATACCTCGACATTAGGTTTAATGACTTTGAAGGGTCATTGCCAGCTGAGCTATTCAAGAAAGAACTCGATGCAATTTTCTTGAATAATAATCGTTTCAGATCTGTGATCCCCACAACACTTGGCAAATCCAAAGCTTCAGTAGTCACATTTGCAAACAACAAGTTCACTGGCTGCATTCCAAATTCAATTGGTGAAATGGAAGGTTTGAATGAGATTGTCTTCTTGGGCAATGATCTCAAAGGTTGCTTCCCAGAAGAGCTTGGAATGCTTGGCAATTTGACTTTGTTTGATGCCAGAAAGAATGGATTAGTTGGTGTTCTGCCTAAGACATTGTCAGGATTGAAGAGAGTACAGATCATGGACATTTCAAATAATAAACTGACGGGGTATGTGCCTGAGAGTGTATGCAAGTTGCCAAGCTTGTCAAATTTCACTTTCTCTAACAACTACTTCAATGGGGAGGCTCAAGCTTGCTTGCCATCTAAGAAAGCCAAAGTTGTGTTTGATGATGATGACAACTGTTTACCTGGACGAAGAAATCAGAGAAGTTCGAAGAAATGCTTCCCCGTTGTGGCTAAACCTGTGGACTGCAGCAAGCAGTGTGGTGGGAGAGCAACACCAAAGCCAAGTCCCAAGCACGAGAGCCATCCACCGAAGCATGAAACACCAAAACCTAAGCCAATGCCTCCTGCATCATCACCTGACCCAGCTAGTGGATTGCCGGTCACACCGATTCGTCAGAGTCCACAACCTCCACAAACTGTTTACTCTCCTCCAATTCCAAAAGCTGAACCACCTAAAGCACCAGAGACCCCTGCACCATCGCCTGATCCATCTGCTGCATTGCCTGTGACACCAATTCGTCGTCGGACCCCACCTCAACCATCACCTGTGCATTCACCCCCACCTCCGACAATAGTTCAGTCTCCTCCACCTCCAGTGCATTCACCACCACCCCCAGTACCAGTTAAGTCGCCTCCACCTCCAGTCTATTCACCCCCACCACCAGTATACTCTCCTCCACCCCCTCCACCTGCCAAATCTCCACCTCCACCACTCCCCTCGCCACCGCCTCCATCTCCTGTATATACACCCCCCCCACCGGTATACTCTCCCCCACCCCCTTCACCAGTCCAAACACCACCACCACCTGTACACTCTCCACCTCCACCAGTACACTCACCACCACCGCCACCACCTGTACACGATCCACCTCCACCAGAACACTCGCCGCCACCACCACCTCCTGTACAGTCTCCACCTCCACCAGTACACTCACCACCTCCACCAGTACACTCTCCACCTCCACCAGTACACTCGCCACCTCCACCAGAACACTCACCGCCTCCACCATTTCACTCACCACCTCCACCAGTCCATTCTCAACCTCCACCAGTACTCTCCCCACCTCCACCAGTACATTCACCGCCTCCACCTGTCAACTCTCCACCTCCACCCCCACCAGTTTCCTCTCCACCACCTCCTACTGCTTCACCTCCTCCTATTGTGTCTACACCAGCCCCAGTCTTTGATATCAACCTCCCACCAACCATCGGAGCCCAGTACTCATCCCCACCTCCTCCAGTGTTCCAAGGCTACTAA 2190 0.4932 MAIPISTKALGCFLFFSFFVISSFSTFSLALTDAEASLIASTQRRSLTDNKGVLPPNYEHEVDIKETFPNGRLRRAYIALQAWKKAIYSDPKNMTGNWVGANVCDYHGVFCTQALDDPKLMVVAGVDLNHGDIAGYLPVELGLLTDVALFHLNSNRFCGIVPKSLSNLTLMHEFDISNNRFVGPFPYVVLEWPRVKYLDIRFNDFEGSLPAELFKKELDAIFLNNNRFRSVIPTTLGKSKASVVTFANNKFTGCIPNSIGEMEGLNEIVFLGNDLKGCFPEELGMLGNLTLFDARKNGLVGVLPKTLSGLKRVQIMDISNNKLTGYVPESVCKLPSLSNFTFSNNYFNGEAQACLPSKKAKVVFDDDDNCLPGRRNQRSSKKCFPVVAKPVDCSKQCGGRATPKPSPKHESHPPKHETPKPKPMPPASSPDPASGLPVTPIRQSPQPPQTVYSPPIPKAEPPKAPETPAPSPDPSAALPVTPIRRRTPPQPSPVHSPPPPTIVQSPPPPVHSPPPPVPVKSPPPPVYSPPPPVYSPPPPPPAKSPPPPLPSPPPPSPVYTPPPPVYSPPPPSPVQTPPPPVHSPPPPVHSPPPPPPVHDPPPPEHSPPPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPEHSPPPPFHSPPPPVHSQPPPVLSPPPPVHSPPPPVNSPPPPPPVSSPPPPTASPPPIVSTPAPVFDINLPPTIGAQYSSPPPPVFQGY* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00734 729 PRINTS Proline rich extensin signature 482 498 - -
Pte4g00734 729 PRINTS Proline rich extensin signature 461 482 - -
Pte4g00734 729 PRINTS Proline rich extensin signature 445 457 - -
Pte4g00734 729 PRINTS Proline rich extensin signature 418 434 - -
Pte4g00734 729 Gene3D Ribonuclease Inhibitor 76 373 IPR032675 -
Pte4g00734 729 MobiDBLite consensus disorder prediction 484 702 - -
Pte4g00734 729 MobiDBLite consensus disorder prediction 441 477 - -
Pte4g00734 729 MobiDBLite consensus disorder prediction 405 419 - -
Pte4g00734 729 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 76 375 - -
Pte4g00734 729 MobiDBLite consensus disorder prediction 394 729 - -
Pte4g00734 729 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 15 610 - -
Pte4g00734 729 SUPERFAMILY L domain-like 78 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00734 Pte-Chr4 38218804 38220993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00734 1 573 Trihelix Transcription Factor Family AT3G19020 51.809 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00734 - - qsa:O6P43_011664 596.66