Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00729 ATGCCCTATCAAACTCCTATGTTTTTGCTCAACAGGTCACTCGCTATATTGAAGTTTTCTTCAAAGAAAATCAACATGGAAAGTGATGCTCAAGACAATTTGGTTGCCTCTTCTTCCTTCTCGACAAGCACTTCTTCTTCTTCATCCTCCTCTACCTCCTCTTCTTTATTACCAACTTATTCTTCTTCTTCCTCAAGCAGCTCAGTTTCCAAAGTTTCATCAGAATTAGAAGATGGTAACAAATGTAAGAAAAGGCAGAGAAGTGAGGATAACAGTGACAGCAAGCATCCAACGTATAGAGGAGTAAGGATGAGGGCTTGGGGCAAGTGGGTGTCTGAAATTCGCGAGCCGAGGAAGAAGTCAAGGATATGGCTTGGCACATATCCTACAGCTGAAATGGCAGCTAGAGCACATGATGTGGCTGCTTTAGCCATCAAAGGTAACACTGCTTATCTCAATTTTCCTCATTTGGCTCAAGAGCTTCCACGACCAGTGAGTAAATCTCCCAAAGACATTCAAGAAGCTGCGGCTAAGGCTGCAGCCACCATGTCCATTGAAGCTAAGGAAAGCGCTGGAGATGACGGTGAAGTGGGGACAAGTCAAGCTGAGCTTCCTACATCATCGTCAAATTTGTCTTTGGACAACAGTCAAGAGCCAGCGATAAGCTCACCTTCTGTTGATGACAGTGATGATGCATTGTTTGACCTACCAGATCTCTTCACTGATTCTGGAAATGATGGACTCATCAGGAGCTACTCATTCTCATGGCATTTATGTTGTGCAGCTGAAACTGGTTTCAGATTTGATGAGCCCTTCTTGTGGGAAAGCAACTAG 834 0.4412 MPYQTPMFLLNRSLAILKFSSKKINMESDAQDNLVASSSFSTSTSSSSSSSTSSSLLPTYSSSSSSSSVSKVSSELEDGNKCKKRQRSEDNSDSKHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNTAYLNFPHLAQELPRPVSKSPKDIQEAAAKAAATMSIEAKESAGDDGEVGTSQAELPTSSSNLSLDNSQEPAISSPSVDDSDDALFDLPDLFTDSGNDGLIRSYSFSWHLCCAAETGFRFDEPFLWESN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00729 277 MobiDBLite consensus disorder prediction 76 99 - -
Pte4g00729 277 FunFam Ethylene-responsive transcription factor 2 97 156 - -
Pte4g00729 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 83 243 - -
Pte4g00729 277 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Pte4g00729 277 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Pte4g00729 277 MobiDBLite consensus disorder prediction 31 75 - -
Pte4g00729 277 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Pte4g00729 277 MobiDBLite consensus disorder prediction 163 228 - -
Pte4g00729 277 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Pte4g00729 277 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Pte4g00729 277 Gene3D AP2/ERF domain 98 156 IPR036955 GO:0003700|GO:0006355
Pte4g00729 277 MobiDBLite consensus disorder prediction 31 99 - -
Pte4g00729 277 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Pte4g00729 277 MobiDBLite consensus disorder prediction 200 224 - -
Pte4g00729 277 CDD AP2 99 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00729 Pte-Chr4 38157971 38159057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00729 86 273 AP2-EREBP Transcription Factor Family AT2G44940 53.774 2.29e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte4g00729 AP2 6.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00729 - - qsa:O6P43_017345 252.677