Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00702 ATGGGAAAGAAAGGGAGTTGGTTTTCAGCAATCAAGCGTGTATTCACACACCACTCCAAAGAGAAAGTTGTAAACGATCCAGAGAAGAAAAGCACAAAAGAGAAGAAAAAGAAGGGGTTAGGGAAACTGAGATCACATGGGGAGACTAATTCATTTGTTCCCTTGTTTAGAGAGCCCAGTAGCATTGAAAAAATATTTGGGGAATTTGAAAGAGAGCAACAACTACTGACACTCAGACCTTCTACTCCTCTTGAGCAACCGAAAACACCCACATTTGTTCCTCCTCCTAGAGCTGCATCTCCCCGCCCTCCATCTCCAAAGGTTCCTTCACCAAGGGCACCGTCATCAGGAGCTGCCTCTCCCAAGGCTGCTTCTCCTGCAGCTGTATCCCCTAAGGTTGTTCAGCAACACAGGGAAGTCTACTACAGACCAGAACCAGCTCCAAGGAATCTCCATGCCTCTGCAACAAAGATCCAAGCAGCTTTTAGGGGTTATGTGGCTAGGAGGAGCTTCAGAGCTCTTAAGGGTCTTGTAAGGCTTCAAGGAGTAGTGCGAGGACATAATGTAAAGAGGCAAACTGCAAATGCTATGAAATACATGCAGCTCTTGGTGAGAGTTCAGACGCAGATCCAGTCTCGTAGGATCCAGTTTTTAGAAAATCAGGCACGGTATCAAGCTGAACACAAACATGAAAAGGACCTGGAGAGCACTCTGAGCAAGTTCACCTTAGGCCATACTTCTGAGGCAGGTAATGCTGATGATTGGGATGATAGCTTGCTAACAAAAGAAGAGATAGAAGCAAGGCTGCATAGGAAAGTGGAAGGCATCATCAAAAAAGAGAGAGCGATGGCATATGCATACTCTCATCAGTTATGTAAAGCAACTCCGAGATCAAGTCAAACGCCGGTAAGGGATACACTAGCTGGCAGATTTCCATGGTGGTGGAATTGGTTAGAGAGACAATTGCCTGCTGCAAATCAAATTCCACCCGAAAGTCAAGTGTTGAAGAATTTTCAATTTACTCCCCCGAGGCCATATTCTGAACAAAGAGGAAGTCCGTTTCCAGCATCAAGCACACATCACATTGGATACGACAATATGGAGACACTCACTCCTAAGTCCACGAAATCCGCCATTGTTACATCTGCAAAGCCAATTGCAAGAACCCCGCCTCCAAGAGCAACCCCACAAGTGAATCATCACTCAGGTTTTCCGAAATATTCAAGAACGAGAGGCATTAACAATGGAGGTGATTCTCCTTTTTATATAAAAGATGATGACAGCCTCACAAGCTGCCCACCATTTTCTGTCCCAAACTACATGGCTGCCACAGTTTCTGCTAAAGCTAAAGCACGCACTGCAAGTACTCCAAGCGAAAGGTATGCAGGAGGGAGTCCAAGCAGTGAATCATCAAAGAGAAGAGTTTCATTTCCCTTGGCTGAAGGCATTAGATCCTTCAAATGGACAAACGGGTCGTTGTTTTCAAACATTGACCCCAGCAAAAAACATCAGTCACTTCAATCTTTAGGAAACGCCAGTGTGGATTCAACAGTTTCTTTGCCTGCAGGTATTGGAGTTGGCAAGAAACCATTTAACAGATTTGTGTGA 1608 0.4509 MGKKGSWFSAIKRVFTHHSKEKVVNDPEKKSTKEKKKKGLGKLRSHGETNSFVPLFREPSSIEKIFGEFEREQQLLTLRPSTPLEQPKTPTFVPPPRAASPRPPSPKVPSPRAPSSGAASPKAASPAAVSPKVVQQHREVYYRPEPAPRNLHASATKIQAAFRGYVARRSFRALKGLVRLQGVVRGHNVKRQTANAMKYMQLLVRVQTQIQSRRIQFLENQARYQAEHKHEKDLESTLSKFTLGHTSEAGNADDWDDSLLTKEEIEARLHRKVEGIIKKERAMAYAYSHQLCKATPRSSQTPVRDTLAGRFPWWWNWLERQLPAANQIPPESQVLKNFQFTPPRPYSEQRGSPFPASSTHHIGYDNMETLTPKSTKSAIVTSAKPIARTPPPRATPQVNHHSGFPKYSRTRGINNGGDSPFYIKDDDSLTSCPPFSVPNYMAATVSAKAKARTASTPSERYAGGSPSSESSKRRVSFPLAEGIRSFKWTNGSLFSNIDPSKKHQSLQSLGNASVDSTVSLPAGIGVGKKPFNRFV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00702 535 ProSiteProfiles IQ motif profile. 151 179 IPR000048 GO:0005515
Pte4g00702 535 Pfam Protein of unknown function (DUF4005) 419 482 IPR025064 -
Pte4g00702 535 Pfam IQ calmodulin-binding motif 152 172 IPR000048 GO:0005515
Pte4g00702 535 ProSiteProfiles IQ motif profile. 175 201 IPR000048 GO:0005515
Pte4g00702 535 MobiDBLite consensus disorder prediction 386 411 - -
Pte4g00702 535 MobiDBLite consensus disorder prediction 87 111 - -
Pte4g00702 535 MobiDBLite consensus disorder prediction 18 34 - -
Pte4g00702 535 Gene3D - 149 201 - -
Pte4g00702 535 MobiDBLite consensus disorder prediction 450 474 - -
Pte4g00702 535 PANTHER IQ-DOMAIN 5-RELATED 1 480 - -
Pte4g00702 535 MobiDBLite consensus disorder prediction 76 135 - -
Pte4g00702 535 SMART iq_5 150 172 IPR000048 GO:0005515
Pte4g00702 535 MobiDBLite consensus disorder prediction 18 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00702 Pte-Chr4 37853379 37856291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00702 1 536 IQD Protein Family AT3G59690 51.215 1.38e-150 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00702 - - qsa:O6P43_000027 652.129