LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte4g00702	ATGGGAAAGAAAGGGAGTTGGTTTTCAGCAATCAAGCGTGTATTCACACACCACTCCAAAGAGAAAGTTGTAAACGATCCAGAGAAGAAAAGCACAAAAGAGAAGAAAAAGAAGGGGTTAGGGAAACTGAGATCACATGGGGAGACTAATTCATTTGTTCCCTTGTTTAGAGAGCCCAGTAGCATTGAAAAAATATTTGGGGAATTTGAAAGAGAGCAACAACTACTGACACTCAGACCTTCTACTCCTCTTGAGCAACCGAAAACACCCACATTTGTTCCTCCTCCTAGAGCTGCATCTCCCCGCCCTCCATCTCCAAAGGTTCCTTCACCAAGGGCACCGTCATCAGGAGCTGCCTCTCCCAAGGCTGCTTCTCCTGCAGCTGTATCCCCTAAGGTTGTTCAGCAACACAGGGAAGTCTACTACAGACCAGAACCAGCTCCAAGGAATCTCCATGCCTCTGCAACAAAGATCCAAGCAGCTTTTAGGGGTTATGTGGCTAGGAGGAGCTTCAGAGCTCTTAAGGGTCTTGTAAGGCTTCAAGGAGTAGTGCGAGGACATAATGTAAAGAGGCAAACTGCAAATGCTATGAAATACATGCAGCTCTTGGTGAGAGTTCAGACGCAGATCCAGTCTCGTAGGATCCAGTTTTTAGAAAATCAGGCACGGTATCAAGCTGAACACAAACATGAAAAGGACCTGGAGAGCACTCTGAGCAAGTTCACCTTAGGCCATACTTCTGAGGCAGGTAATGCTGATGATTGGGATGATAGCTTGCTAACAAAAGAAGAGATAGAAGCAAGGCTGCATAGGAAAGTGGAAGGCATCATCAAAAAAGAGAGAGCGATGGCATATGCATACTCTCATCAGTTATGTAAAGCAACTCCGAGATCAAGTCAAACGCCGGTAAGGGATACACTAGCTGGCAGATTTCCATGGTGGTGGAATTGGTTAGAGAGACAATTGCCTGCTGCAAATCAAATTCCACCCGAAAGTCAAGTGTTGAAGAATTTTCAATTTACTCCCCCGAGGCCATATTCTGAACAAAGAGGAAGTCCGTTTCCAGCATCAAGCACACATCACATTGGATACGACAATATGGAGACACTCACTCCTAAGTCCACGAAATCCGCCATTGTTACATCTGCAAAGCCAATTGCAAGAACCCCGCCTCCAAGAGCAACCCCACAAGTGAATCATCACTCAGGTTTTCCGAAATATTCAAGAACGAGAGGCATTAACAATGGAGGTGATTCTCCTTTTTATATAAAAGATGATGACAGCCTCACAAGCTGCCCACCATTTTCTGTCCCAAACTACATGGCTGCCACAGTTTCTGCTAAAGCTAAAGCACGCACTGCAAGTACTCCAAGCGAAAGGTATGCAGGAGGGAGTCCAAGCAGTGAATCATCAAAGAGAAGAGTTTCATTTCCCTTGGCTGAAGGCATTAGATCCTTCAAATGGACAAACGGGTCGTTGTTTTCAAACATTGACCCCAGCAAAAAACATCAGTCACTTCAATCTTTAGGAAACGCCAGTGTGGATTCAACAGTTTCTTTGCCTGCAGGTATTGGAGTTGGCAAGAAACCATTTAACAGATTTGTGTGA	1608	0.4509	MGKKGSWFSAIKRVFTHHSKEKVVNDPEKKSTKEKKKKGLGKLRSHGETNSFVPLFREPSSIEKIFGEFEREQQLLTLRPSTPLEQPKTPTFVPPPRAASPRPPSPKVPSPRAPSSGAASPKAASPAAVSPKVVQQHREVYYRPEPAPRNLHASATKIQAAFRGYVARRSFRALKGLVRLQGVVRGHNVKRQTANAMKYMQLLVRVQTQIQSRRIQFLENQARYQAEHKHEKDLESTLSKFTLGHTSEAGNADDWDDSLLTKEEIEARLHRKVEGIIKKERAMAYAYSHQLCKATPRSSQTPVRDTLAGRFPWWWNWLERQLPAANQIPPESQVLKNFQFTPPRPYSEQRGSPFPASSTHHIGYDNMETLTPKSTKSAIVTSAKPIARTPPPRATPQVNHHSGFPKYSRTRGINNGGDSPFYIKDDDSLTSCPPFSVPNYMAATVSAKAKARTASTPSERYAGGSPSSESSKRRVSFPLAEGIRSFKWTNGSLFSNIDPSKKHQSLQSLGNASVDSTVSLPAGIGVGKKPFNRFV*	536

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte4g00702	535	ProSiteProfiles	IQ motif profile.	151	179	IPR000048	GO:0005515
	Pte4g00702	535	Pfam	Protein of unknown function (DUF4005)	419	482	IPR025064	-
	Pte4g00702	535	Pfam	IQ calmodulin-binding motif	152	172	IPR000048	GO:0005515
	Pte4g00702	535	ProSiteProfiles	IQ motif profile.	175	201	IPR000048	GO:0005515
	Pte4g00702	535	MobiDBLite	consensus disorder prediction	386	411	-	-
	Pte4g00702	535	MobiDBLite	consensus disorder prediction	87	111	-	-
	Pte4g00702	535	MobiDBLite	consensus disorder prediction	18	34	-	-
	Pte4g00702	535	Gene3D	-	149	201	-	-
	Pte4g00702	535	MobiDBLite	consensus disorder prediction	450	474	-	-
	Pte4g00702	535	PANTHER	IQ-DOMAIN 5-RELATED	1	480	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte4g00702	Pte-Chr4	37853379	37856291	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte4g00702	1	536	IQD Protein Family	AT3G59690	51.215	1.38e-150	440

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte4g00702	-		-	qsa:O6P43_000027	652.129

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