Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00687 ATGGAGAATATAACCGCTCAATTGAAGCGCGGGATCTCTCGCCAATTCTCGACTGGGTCGCTGGGGAGGAATTTGAGCCGTCAATTAACGCGGCAATCGTCCTTGGATCCCAGGAGGAACAATATGAGGTTCAGCTTTGGACGGCAGTCGTCGTTGGACCCAATTCGCCGGAGTCCTTCCCATGACGATGCTGACTTGACGGTTCCGGAGAATCTTGACTCGACCATGCAGTTGCTATTCATGGCGAGCAAGGGTGACGTCAAGGGAGTTCAGGATTTGCTCGATGATGGGACTGATGTAAATAGTATTGATTTGGATGGACGTACCGCCTTGCATATTGCTGCTTGTGAAGGCCATGTTGAGGTCGTCAAGCTCTTGCTCGTCCGCAAAGCCAATATTGATGCTCGCGATCGCTGGGGCAGTACGGCAGCAGCAGATGCCAAGTATTATGGAAACACAGAGGTTTACAACACACTCAAGGCTCGTGGAGCCAACATTCCGAAAACTAGGAAAACTCCAATGGCAGTTTCAAATCCTAAAGAAATTCCAGAGTATGAGCTTAATCCCCTGGAGCTACAAGTCCGAAGGAGCGATGGCGACTTAAAGGGAACATATAGGGTAGCTAAATGGAACGGTACAAAGGTCGTTGTAAAGATATTTGACAAGGATAGCTATTCTGATCCTGAAAGCATAGAAGCTTTCATACACGAGCTGACTTTATTAGAAAAGATGCGGCACCCTAACGTAGTTCAATTTGTTGGAGCTGTTACACAAAATAATCCTATGATGATTGTTTCGGAGTATCACCGCAAAGGGGATATGGCAAGCTATCTTCAAAAGAAAGGTCGTTTGTCTCCATCAAAAGCTCTGAGATTTGCTCTTGATATTGCTAGGCATGTGATGGGCATGAATTATCTGCACGAATGCAAACCGGATCCAGTTATCCACTGTGATTTAAGGCCCAAAAACATTTTGCTGGATAATGGAGGGCAGTTGAAGGTAGCTGGATTTGGTTTAGTGAAATTGTCAAAAATTTCACCTGATAAGGCAAAGCTTGCACGACCAGTCACAAACATTGATCTTTCAAGCTTATATGTGGCACCAGAGATGTACAATGATGAAATATTTGACAGAAGTGTGGATGCATATTCATTTGGTCTTATTTTATATGAGATGATAGAGGGTATAGCTCCCTTCCATCCCAAGTCTTCTGAAGAAGCTTTGAAATTATTGTGCATAGAACGAAAAAGACCACCATTCAAGGTCAAAACAAAAAGTTATCCTCCAGATCTAAGAGAGCTAATTAGTGAATGCTGGGATCCCGAACCTGTTGTGAGGCCAACTTTCTCAGAGATTATAGTACGTTTAGACAAAATAGTTGCCAACTGCTCGAAGCAAGGGTGGTGGAAGGACACTTTCAAGCTTCCTTGGTACTGTCTCATATTCTATACCTTCTTTTAG 1461 0.4408 MENITAQLKRGISRQFSTGSLGRNLSRQLTRQSSLDPRRNNMRFSFGRQSSLDPIRRSPSHDDADLTVPENLDSTMQLLFMASKGDVKGVQDLLDDGTDVNSIDLDGRTALHIAACEGHVEVVKLLLVRKANIDARDRWGSTAAADAKYYGNTEVYNTLKARGANIPKTRKTPMAVSNPKEIPEYELNPLELQVRRSDGDLKGTYRVAKWNGTKVVVKIFDKDSYSDPESIEAFIHELTLLEKMRHPNVVQFVGAVTQNNPMMIVSEYHRKGDMASYLQKKGRLSPSKALRFALDIARHVMGMNYLHECKPDPVIHCDLRPKNILLDNGGQLKVAGFGLVKLSKISPDKAKLARPVTNIDLSSLYVAPEMYNDEIFDRSVDAYSFGLILYEMIEGIAPFHPKSSEEALKLLCIERKRPPFKVKTKSYPPDLRELISECWDPEPVVRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPWYCLIFYTFF* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00687 486 Pfam Protein tyrosine and serine/threonine kinase 203 455 IPR001245 GO:0004672|GO:0006468
Pte4g00687 486 ProSiteProfiles Protein kinase domain profile. 190 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00687 486 PIRSF ILK 8 477 - -
Pte4g00687 486 FunFam Integrin-linked protein kinase family 270 472 - -
Pte4g00687 486 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Pte4g00687 486 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Pte4g00687 486 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 134 459 - -
Pte4g00687 486 FunFam Integrin-linked protein kinase 1 47 185 - -
Pte4g00687 486 SUPERFAMILY Ankyrin repeat 73 168 IPR036770 -
Pte4g00687 486 Gene3D Transferase(Phosphotransferase) domain 1 270 472 - -
Pte4g00687 486 MobiDBLite consensus disorder prediction 26 54 - -
Pte4g00687 486 ProSitePatterns Tyrosine protein kinases specific active-site signature. 314 326 IPR008266 GO:0004672|GO:0006468
Pte4g00687 486 Pfam Ankyrin repeats (3 copies) 79 167 IPR002110 GO:0005515
Pte4g00687 486 SUPERFAMILY Protein kinase-like (PK-like) 206 456 IPR011009 -
Pte4g00687 486 SMART ANK_2a 139 168 IPR002110 GO:0005515
Pte4g00687 486 SMART ANK_2a 257 288 IPR002110 GO:0005515
Pte4g00687 486 SMART ANK_2a 106 135 IPR002110 GO:0005515
Pte4g00687 486 SMART ANK_2a 71 102 IPR002110 GO:0005515
Pte4g00687 486 MobiDBLite consensus disorder prediction 26 67 - -
Pte4g00687 486 Gene3D Phosphorylase Kinase; domain 1 187 269 - -
Pte4g00687 486 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Pte4g00687 486 PRINTS Tyrosine kinase catalytic domain signature 308 326 IPR001245 GO:0004672|GO:0006468
Pte4g00687 486 PRINTS Tyrosine kinase catalytic domain signature 380 402 IPR001245 GO:0004672|GO:0006468
Pte4g00687 486 PRINTS Tyrosine kinase catalytic domain signature 427 449 IPR001245 GO:0004672|GO:0006468
Pte4g00687 486 FunFam serine/threonine-protein kinase STY46-like 187 270 - -
Pte4g00687 486 Gene3D - 69 182 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00687 Pte-Chr4 37698120 37702232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00687 1 477 MAP Kinase Kinase Kinase AT2G43850 76.923 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pte4g00687 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00687 - - qsa:O6P43_028049 828.165