Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00682 ATGGAAGGAGGAAACGATGATGCCGTCATGTCAGACGCGGCGCCGCCGGCTGTACCTCCTCAGCCTATGGGGATTGACAATATTCCGGCCACTCTCAGCCACGGAGGAAGGTTCATACAGTACAATATCTTCGGGAACATGTTCGAGGTTACTGCAAAGTACAAGCCTCCCATCATGCCCATTGGTAAAGGCGCTTATGGCATCGTTTGCTCGGCTTTGAATTCTGAGACTAATGAGAACGTCGCCATCAAGAAGATAGCCAATGCATTTGATAACAAGATTGATGCCAAGAGGACCCTCCGTGAGATCAAGCTTCTACGCCACATGGATCATGAAAATGTGGTTGCCATCAGGGATATAATACCACCCCCACAAAGAGAGGCTTTTAATGATGTTTATATAGCGTATGAGCTCATGGACACTGACTTGCACCAAATTATCCGCTCCAACCAAGCTTTATCAGAAGAGCACTGTCAGTATTTCCTCTATCAAATCCTCCGTGGACTAAAATACATTCATTCTGCCAATGTGCTACACCGCGATCTAAAGCCCAGCAATCTTCTACTGAATGCTAACTGTGACTTAAAGATTTGTGACTTTGGACTTGCTCGTGTTACATCAGAAACTGATTTTATGACGGAATATGTTGTTACAAGATGGTATCGTGCACCAGAACTTTTGTTGAACTCTTCTGACTACACTGCAGCAATTGATGTATGGTCAGTTGGTTGTATTTTCATGGAATTGATGGATCGCAAGCCCTTATTTCCTGGAAGAGATCATGTGCATCAGCTGCGTTTACTTATGGAGTTAATTGGCACCCCATCTGAAGCAGAATTGGGCTTTCTGAATGAAAATGCTAAACGATACATCAGGCAGCTACCTATGCATCAGCGCCAGTCCTTCACTGAGAAGTTTCCTCATGTCCATCCTTTAGCTATTGATCTGGTTGAAAAAATGTTGACCTTTGATCCTAGGCAGCGCATTACTGTTGAAGACGCCCTCGCTCACCCCTATTTGACATCTCTGCATGACATAAGCGATGAGCCTGTGTGCATGACTCCTTTCAGCTTTGACTTTGAGCAGCACGCACTGACTGAGGAACAGATGAAAGAATTGATATACAGAGAGGCTCTTGCATTTAATCCCGAGTATCAGCAGTAA 1164 0.4476 MEGGNDDAVMSDAAPPAVPPQPMGIDNIPATLSHGGRFIQYNIFGNMFEVTAKYKPPIMPIGKGAYGIVCSALNSETNENVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEAELGFLNENAKRYIRQLPMHQRQSFTEKFPHVHPLAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00682 387 ProSitePatterns Protein kinases ATP-binding region signature. 61 85 IPR017441 GO:0005524
Pte4g00682 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 53 341 - -
Pte4g00682 387 SUPERFAMILY Protein kinase-like (PK-like) 60 348 IPR011009 -
Pte4g00682 387 Pfam Protein kinase domain 60 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00682 387 ProSiteProfiles Protein kinase domain profile. 55 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00682 387 CDD STKc_TEY_MAPK 48 383 - -
Pte4g00682 387 FunFam Mitogen-activated protein kinase 139 367 - -
Pte4g00682 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pte4g00682 387 ProSitePatterns MAP kinase signature. 90 193 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte4g00682 387 MobiDBLite consensus disorder prediction 1 24 - -
Pte4g00682 387 FunFam Mitogen-activated protein kinase 40 149 - -
Pte4g00682 387 Gene3D Transferase(Phosphotransferase) domain 1 139 367 - -
Pte4g00682 387 Gene3D Phosphorylase Kinase; domain 1 38 377 - -
Pte4g00682 387 SMART serkin_6 55 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00682 Pte-Chr4 37674702 37679988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00682 1 388 MAP Kinase Gene Family AT2G43790 88.384 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte4g00682 Pkinase 3.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00682 K14512 - qsa:O6P43_000016 744.577