Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00663 ATGGATAAAGACAAGTCCCATGGGTTTCCTCCTCCTTCTGGTCGTTATTCGAGTTTTTCTCCATCTGGGATTGGTAATTTTAATGTCAAATCAGAGCCGCCATCACCTCCATTCCCTCCACCTGCACCAATTGCTAATTCAGACCCCAGTCACTTTGCACACGGGATGTCCATTGACTCCAGTGGCTATAGTCATGATATAAGCAGAATGCCTGATAACCCTCCTAAAAATAGAGGTCATAGGCGTGCTCACTCGGATATTCTCACCCTACCAGATGATGTCAGTTTTAATAGCGACCTTGGTGTTGTGGGTGCTGGGGATGGGCCCTCATATTCTGATGAGACTGAGGAAGACTTGTTGTCTATGTATCTTGATATGGAAAAATTCAATTCATCATCTGCAACATCAGCATATGAAATGGGAGAACAGTCTTCTTCCTTTCCAGCAGCTCCGGCATCCACATTCACTCCAACATCACAAGTATTTACCTCTGGCGTGGAAAATATTTCCACCAGTACTAATGTGAGGCCTAGAGTTAGACACCAGCACAGCCAGTCCATGCATGGTTCAACAACGATCAAACCGGAAATGATCGTATCTAGTTCAGAAGAGATGTCGGCTGCTAACTCGAAGAAAGGCATGTCAGCTGCTAAGCTTAATGAGCTTGCTCTGGTTGATCCCAAGCGTGCTAAGAGGATATGGGCAAATAGGCAGTCCGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAACTTGAAAGAAAAGTCCAGACCTTGCAAACTGCAGCTACATCTTTGTCTGCTCAATTGACCCTCCTTCAGAGAGACACAAATGGACTGACCGCTGAAAACAGTGAACTGAAGCTACGGTTGCAATCCATGGAACTGCAGGTTCACTTGCAGGATGCATTAAATGATGCATTGAAAGAGGAGATTCGGCATCTAAAGAGACAGACTGGTCAAACGATGCCAAATGAAACACCACCGATGAACTATGGTGCTTCTTTTGGGGGTGGGCAGCAATTGTACCCCGACAATCAAGCAATACATACCCTCTTAACAACTCAGCAGTTTCAACAACTCCAGATACACTCTCAAAAACAGCAGCAACAATTTCAGCAGCAGCAGTTGCAGCACCTTCAACAGCAGCAAATGCATCAGCGGGACCAGCAGCAGCACACTGGGGAGCTGAGAATGAGGACATCTATGTCTTCTCCAAGCCAGAATGAAAATACTTCTTCAAATCGGAACCCTTCCTCAGAAAAGGATTCGTAA 1281 0.4575 MDKDKSHGFPPPSGRYSSFSPSGIGNFNVKSEPPSPPFPPPAPIANSDPSHFAHGMSIDSSGYSHDISRMPDNPPKNRGHRRAHSDILTLPDDVSFNSDLGVVGAGDGPSYSDETEEDLLSMYLDMEKFNSSSATSAYEMGEQSSSFPAAPASTFTPTSQVFTSGVENISTSTNVRPRVRHQHSQSMHGSTTIKPEMIVSSSEEMSAANSKKGMSAAKLNELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTAATSLSAQLTLLQRDTNGLTAENSELKLRLQSMELQVHLQDALNDALKEEIRHLKRQTGQTMPNETPPMNYGASFGGGQQLYPDNQAIHTLLTTQQFQQLQIHSQKQQQQFQQQQLQHLQQQQMHQRDQQQHTGELRMRTSMSSPSQNENTSSNRNPSSEKDS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00663 426 Gene3D - 227 304 - -
Pte4g00663 426 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 408 - -
Pte4g00663 426 MobiDBLite consensus disorder prediction 13 29 - -
Pte4g00663 426 Pfam bZIP transcription factor 228 282 IPR004827 GO:0003700|GO:0006355
Pte4g00663 426 MobiDBLite consensus disorder prediction 1 83 - -
Pte4g00663 426 MobiDBLite consensus disorder prediction 381 420 - -
Pte4g00663 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 289 IPR004827 GO:0003700|GO:0006355
Pte4g00663 426 SUPERFAMILY Leucine zipper domain 228 279 IPR046347 GO:0003700|GO:0006355
Pte4g00663 426 Coils Coil 365 385 - -
Pte4g00663 426 CDD bZIP_plant_RF2 229 278 IPR044759 GO:0003700|GO:0006355
Pte4g00663 426 FunFam probable transcription factor PosF21 227 280 - -
Pte4g00663 426 Coils Coil 244 271 - -
Pte4g00663 426 SMART brlzneu 224 288 IPR004827 GO:0003700|GO:0006355
Pte4g00663 426 MobiDBLite consensus disorder prediction 32 46 - -
Pte4g00663 426 MobiDBLite consensus disorder prediction 381 426 - -
Pte4g00663 426 Coils Coil 279 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00663 Pte-Chr4 37464198 37467591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00663 15 355 bZIP Transcription Factor Family AT1G06070 66.569 2.07e-149 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte4g00663 bZIP_1 5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00663 - - qsu:112034768 502.671