Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00658 ATGAAAATTCAGTGTGATGTGTGTGAGAAGGCTCCAGCTACTGTGATCTGTTGTGCAGATGAAGCAGCTCTGTGTGCGAAATGTGATGTTGAGGTTCATGCAGCCAACAAGCTAGCTAGCAAGCACCAAAGGCTGCTCATTCAGTGCCTATCAAACAAGCTTCCCAGATGTGATATATGCCAAGATAAGCCAGCATTCATTTTCTGCGTGGAAGATAGAGCTCTCTTCTGTCAGGACTGCGACGAACCAATTCATTCAGCCAATAGACTTTCTGCAAACCACCAGCGATTCTTGGCTACTGGAATCCGAGTGGCTCTAAATTCTAATTGTGCCAAGGACACTGACAAGTATCATTTGGAGCCACCCAAACCTCGTGGAAATTCAGACCAAATATCCATCAAAAACCCCCCACAGCAAGTGTCTAGCTTTACATCCCCTTGGGCTGTTGATGACCTATTGCAGTTTTCAGAATTCGGTTCACCAGACAAGAAAGAATCTCTTGAGATAGGAGAACTGGATTGGCTTCCAGAATTGAGTCTTTTTGGGGAACAGACCCCTCAAGAAACCTTGGCTGCAGCTGAAGTCCCTCAGCTTCCACTGTCACAAACAAGCAATGTCACTTCATACAGGACCCCCAAGTGGAATATGCCCTTCAAGAAACCTCGGCTTGAAATCCTAGATGAGGATGATGAGCATTTTACTGTCCCCGACCTAGGTTGA 720 0.4611 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLIQCLSNKLPRCDICQDKPAFIFCVEDRALFCQDCDEPIHSANRLSANHQRFLATGIRVALNSNCAKDTDKYHLEPPKPRGNSDQISIKNPPQQVSSFTSPWAVDDLLQFSEFGSPDKKESLEIGELDWLPELSLFGEQTPQETLAAAEVPQLPLSQTSNVTSYRTPKWNMPFKKPRLEILDEDDEHFTVPDLG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00658 239 CDD Bbox1_BBX-like 5 47 - -
Pte4g00658 239 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pte4g00658 239 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pte4g00658 239 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Pte4g00658 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte4g00658 239 Pfam B-box zinc finger 4 45 IPR000315 GO:0008270
Pte4g00658 239 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Pte4g00658 239 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pte4g00658 239 MobiDBLite consensus disorder prediction 113 133 - -
Pte4g00658 239 CDD Bbox1_BBX-like 57 98 - -
Pte4g00658 239 Gene3D Classic Zinc Finger 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00658 Pte-Chr4 37446931 37449356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00658 1 163 Orphan Transcription Factor Family AT1G06040 65.476 5.43e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pte4g00658 zf-B_box 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00658 - - cave:132189631 394.43