Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00653 ATGGGAAGGCATTTCTTAATCTGGTTTCTGAATCTAAGATCAAGCGGAGCTGGATCCCTTGTAGGACTTGTGGTTGCGTCATATTTATGCTGCTTGGTTTCAGGTCTCGGTTCCATGTCAGCCATTGCTGTATCTTATGGTGATAGAGGTTCTGTTTTCTGTGGATTGAGGTCAGATGGGTCTCACACAGTCAACTGTTATGGTTCTAACTCAGCCATTGTATATGGAACTCCTCCTCATTTTTCATTCTTTGGTCTAGCAGCTGGTGATGGCTTTGTCTGTGGTCTTCAAATGGAATCTAGTCAACCTTACTGTTGGGGTAGCACCAATTACATCAAATTGGGTGTTCCTCAGCCTATGGTTAATGGAATTCAATACCTAGAAATCAGTGCTGGAGATTACCATGTGTGTGGATTGAGGAAACCACTGACCGGTAGGCTCAGGAACATCTCTTTTGTTGATTGCTGGGGTTACAACATGACTAAGACTTACGTTTTCGATGGGCAGTTCCAGTCGATTTCTGCGGGCTCTGAATTCAATTGTGGACTGTTCTCTCAGAATAGGACTGTTTTTTGTTGGGGTGACGAGACTAGCAGCCGGGTAATTAGCTTGACTCCTAAACACATAAGGTTTCAGAAGATCGCTGCAGGTGGATATCATGTATGCGGGATTTTGGAAGGGATGAATTCTAGAGCTATTTGTTGGGGTAGGAGCTTGGACATTGAGGAAGAAATTTCTACGACATATTCAGGTCAAGGAAATGTTGATTTGGCTCCAAGTAATCCAATGCTTTCAGTTGTTGGAGGAAAATTCCATGCTTGTGGTATCAGAAGCTTTGATCACGAAGTTACTTGCTGGGGTTTTGTTCTCAAGCCAAGCACTCCACCCCCAAGTGGCCTCAAGCTCTTTGAGATTGCTGCTGGAAATTACTTCACCTGTGGAATACTTGCTGAGAAATCTCTTTCACCTTTTTGCTGGGGTGTTGGATTTCCTACTTCTCTTCCTGTAGCAGTCTCACCTGGACTCTGCAAGTCTACACCTTGCCCTCCAGGTTTCTACGAAAAAATTGACCAGAAGAGTGCCCCTTGCAAATCTCCTGACTCACATGTTTGTGTGCCCTGCAGCAATGGCTGTCCTGCTGAGATGTACCAAGAAGTTGAATGCAAATTGAAATCTGATAGGCAATGTGCATATAACTGCTCAGCTTGCTTCTCACCTGAATGCTACTCTAACTGTACTAATTCATACACTACTGTCATGGAAGGCAAGAAGGCTGAGAAATTTTGGTCACTGCAACTTCCAATTGTAATAGCAGAGATTTGTTTTGCAGTGATAGTGGTGAGTATTGTGTCTCTGACCTCAGTTTTGTACGTTCGCTACAAGCTACGGAACTGCAAGTGTTCAGAAAATGGCTCAAAGAACAAAAAACTTGGTGGCACTGGTTCAACTCATCAAAAAGACAGCCATAAAGTCAGGCCTGATTTCGAAGAGCTTAAGCTTAGGAGAGCTCAGACGTTCACTTATGAAGAGCTTGAAAGAGCCACAGGTGGGTTCAAAGAAGAATCCATTGTTGGCAAGGGAAGCTTTTCCTGCGTGTTCAAAGGGACACTGAAAGATGGGACTGTTGTTGCTGTCAAAAGAGCAATCATGTCACCTAATATGCAGAAACATTCCAAAGAGTTTCACACAGAGCTTGATTTGCTTTCCAGATTGAACCATGCTCATTTGCTCAATCTCCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTGCTTGTTTATGAGTTCATGGCTCATGGATCCCTGCATCAACATCTGCATGGAAAAACCAAAGCTTTGAAAGAGCAACTGGATTGGGTTAGAAGGGTCACCATTGCTGTCCAAGCAGCTCGAGGAATCGAATACTTGCATGGTTATGCTTGCCCGCCAGTGATTCACCGTGACATAAAGTCCTCAAACATACTGATAGACGAAGAACACAATGCAAGAGTGTCTGATTTTGGCTTGTCATTGTTAGGGCCAGCTGATAGTAGCTCTCCTTTAGCAGAACTACCAGCTGGAACTCTTGGATATCTTGATCCTGAATATTACAGACTTCACTACCTCACAACCAAATCTGATGTATACAGCTTCGGTGTGCTTCTGTTAGAAATCTTAAGTGGCAGGAAAGCCATTGACATGCAATATGAAGAAGGCAACATTGTTGAGTGGGCAGTGCCGCTTATCAAAGCAGGAGACCTGAATGCAATACTAGACCCGGTTCTAAAACCCCCATCTGATCTTGAAGCTTTGCGAAGAATTGCAAACATGGCCTGCAAATGTGTGAGAATGAGAGGCAAGGAGAGGCCATCAATGGATAAAGTGACTACAGCTTTAGAGAGAGCTCTTGCACAGTTGATGGGGAGTCCATGCAATGAGCAACCTATTTTACCAACTGAGGTTGTTCTGGGAAGTAATAGATTGCATAAGAAGTCATCTCAAAGATCTTCAAACAGGTCAGCGGAAACCGATGTGGTAGAGACTGAAGATCAGAGGATTGAGTTCAGAGCTCCCTCATGGATTACTTTCCCTAGTGTTACATCTTCTCAAAGAAGAAAGTCATCAGTTTCAGATGCAGATGTTGAAGGGAAAAACTCAGAAGCTAAAACTCTGGGAAACCATGGTGGGGGCGATGGTCTAAGGAGTTTGGAGGAAGAAATTGGACCTGCTTCTCCTCAAGAAAGCTTGTTTCTACAGCATAATTTCTAA 2745 0.4379 MGRHFLIWFLNLRSSGAGSLVGLVVASYLCCLVSGLGSMSAIAVSYGDRGSVFCGLRSDGSHTVNCYGSNSAIVYGTPPHFSFFGLAAGDGFVCGLQMESSQPYCWGSTNYIKLGVPQPMVNGIQYLEISAGDYHVCGLRKPLTGRLRNISFVDCWGYNMTKTYVFDGQFQSISAGSEFNCGLFSQNRTVFCWGDETSSRVISLTPKHIRFQKIAAGGYHVCGILEGMNSRAICWGRSLDIEEEISTTYSGQGNVDLAPSNPMLSVVGGKFHACGIRSFDHEVTCWGFVLKPSTPPPSGLKLFEIAAGNYFTCGILAEKSLSPFCWGVGFPTSLPVAVSPGLCKSTPCPPGFYEKIDQKSAPCKSPDSHVCVPCSNGCPAEMYQEVECKLKSDRQCAYNCSACFSPECYSNCTNSYTTVMEGKKAEKFWSLQLPIVIAEICFAVIVVSIVSLTSVLYVRYKLRNCKCSENGSKNKKLGGTGSTHQKDSHKVRPDFEELKLRRAQTFTYEELERATGGFKEESIVGKGSFSCVFKGTLKDGTVVAVKRAIMSPNMQKHSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKTKALKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKAGDLNAILDPVLKPPSDLEALRRIANMACKCVRMRGKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSNRLHKKSSQRSSNRSAETDVVETEDQRIEFRAPSWITFPSVTSSQRRKSSVSDADVEGKNSEAKTLGNHGGGDGLRSLEEEIGPASPQESLFLQHNF* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00653 914 Gene3D Transferase(Phosphotransferase) domain 1 596 803 - -
Pte4g00653 914 Gene3D Phosphorylase Kinase; domain 1 489 595 - -
Pte4g00653 914 Pfam Protein tyrosine and serine/threonine kinase 521 790 IPR001245 GO:0004672|GO:0006468
Pte4g00653 914 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 347 396 IPR001368 GO:0005515
Pte4g00653 914 SMART serkin_6 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00653 914 FunFam Serine/threonine-protein kinase-like protein CR4 35 202 - -
Pte4g00653 914 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 101 142 IPR000408 -
Pte4g00653 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pte4g00653 914 Gene3D - 82 333 IPR009091 -
Pte4g00653 914 ProSiteProfiles Protein kinase domain profile. 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00653 914 FunFam serine/threonine-protein kinase-like protein CCR1 488 595 - -
Pte4g00653 914 MobiDBLite consensus disorder prediction 819 841 - -
Pte4g00653 914 FunFam Receptor protein kinase CRINKLY4 596 798 - -
Pte4g00653 914 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Pte4g00653 914 SUPERFAMILY Protein kinase-like (PK-like) 500 791 IPR011009 -
Pte4g00653 914 SUPERFAMILY RCC1/BLIP-II 37 288 IPR009091 -
Pte4g00653 914 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 23 914 - -
Pte4g00653 914 MobiDBLite consensus disorder prediction 858 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00653 Pte-Chr4 37404161 37407068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00653 20 915 Receptor kinase-like Gene Family AT3G59420 68.071 0.0 1266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte4g00653 PK_Tyr_Ser-Thr 8.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00653 - - qsa:O6P43_028109 1549.64