Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00619 ATGTTTTCTTCTGTATTTCCAAAAATGGAGGATAGTCAACATGTGAACCCTGCTTTAGAAGGAGAAGAAAATTTGATTGCTGCAGCTAAAAATATTGTGAAGGCATTGGGATCCAGTAAGAATCTTACTTGTGATGCTAAGAAAATCCTGGCAGATCTTGGCAGCCAATTGTCTACCATGGCCACACTGAATGAGAGAGAGGTAGAGGGATTCAGTGGATTTGAGGCTGAATTCAGGTCAATTGAGGAAAAGATCATGGGTTGGGAAGAAGATCAATCTATGATATGGGATTCAGGACCTGAAGAAGCTTCTGCATATTTGAATGCCACTGAGGAGGTTCGCCTGTTGATTAATAGGTTAGAGAGGTTGAATTTGAATAAAGAGGATGAAGAGTATCAACTCTTGCAAAGGGCTCATATCGTTCTTCAAACAGCCATGGCAAGGCTTGAAGAAGAGTTTCGAAATTTGTTAATTATAAATATGCAACCTTTTGAGCCTGAATTTGTGTCTTTTCGATCTAGTGAAGAGGATTTAGTTGATGGGAGCTCAACGGTATCTTTAGGTGAGGACTCATTTGAGGACTCACTTCGAAGAGATAGTGTTAGCAGAACCTCTGAAGAATATGTCATTGATTTGGTTCATCAAGACGTGATTCCTGATCTCAGATTTATTGTAAATTTGATGTTTGCTTCTAACTACGATCAGGAATGTTCACATGCCTATATCTTTATTAGGAAGGATGCTTTGGATGAGTGTCTCTATACACTTGACATGGAAAGATTGAGCATTGAAGATGTGCTGAAAATGGAGTGGGGAACTTTAAACTCAAAAATAAAGAGATGGAATTGGGCTATAAAGATCTTCATCCGAGGTTATCTTGCAAGTGAGAAAAGGCTCAGTGATCAGATTTTCGGAGAGGGAGAGCCCACTAGTTTAGCCTGTTTCATTGAGTCGTCGAAGGCTGGAATGCTGCAACTTTTGAATTTCAGTGAAGCCATGTCCATTGGCCCCCATCAACCTGAAAAATTATTCGGTGTTCTTGACATGTATGAAGTATTAGTGGAACTTCTTCCGGATATAAATGCCCTGTACCCAGAGGATGCCGGTTCCTTCATAAGAAGTGAGTGTCATGAGGTTCTAAGAAGGCTAGGTGATTGTGCCAAAGCAACGTTTCTTGAATTTGAGAATGCTGTTGCATCAAACACATCATCAACTCCCTTTGCTGGTGGTGCCATTCATCCTCTGACCAAGTATGTGATGAATTATCTCAGAAATCTTACAGACTACGGCGAAACGCTCAATTTGCTTCTGAAGGATCAACATGAAGATCAAAACATCTCCTTGTCACCTGACATGAGCCAAGATGGGAAGGAAAATGGAAATCAGAGTCCTTTGTGCAGTTTTTTCTCAATGGCCCAACATTTCCGATCAATTGCTTCAATATTAGAATGCAACCTTGATGATAAGTCCAAGCTATACAAGGATACATCCTTGCAGCACTTGTTCTTGATGAACAATATTCACTATATGGCTGAAAAGGCAAAGAAATCTGAACTTCGGTTCATTTATGGGGACGAATGGATTAGGAAACACAACTGGAAATTTCAACAACATGCTTTGAGTTATGAGAGATCATGTTGGAGTTCTGTTCTCTCTTTGCTTAAGGATGAAGGAATTCAAAATCCTGGCACACATTCTGTCTCCATATCTCTTCTAAAGGAGAGGCTGCGGAGTTTTTACGTTGCATTTGAGGAGATTTACCGGTCTCAAACAGCTTGGTTCATCCCAGATCCCGAGCTTCGTGAAGATCTACAAATCTCTACCTCGCAGAAGGTTATCCAAGCTTATAGGACGTTTGTTGGGAGGCATAACTATAAGATAAGCGAAAAGCACATTAAATACAGTCCTGATGATCTACAAACCTACCTTCTTGATTTCTTTGAAGGGTCCCCAAGATCATTACCAAACCCCCATTGGAGATAA 1983 0.4044 MFSSVFPKMEDSQHVNPALEGEENLIAAAKNIVKALGSSKNLTCDAKKILADLGSQLSTMATLNEREVEGFSGFEAEFRSIEEKIMGWEEDQSMIWDSGPEEASAYLNATEEVRLLINRLERLNLNKEDEEYQLLQRAHIVLQTAMARLEEEFRNLLIINMQPFEPEFVSFRSSEEDLVDGSSTVSLGEDSFEDSLRRDSVSRTSEEYVIDLVHQDVIPDLRFIVNLMFASNYDQECSHAYIFIRKDALDECLYTLDMERLSIEDVLKMEWGTLNSKIKRWNWAIKIFIRGYLASEKRLSDQIFGEGEPTSLACFIESSKAGMLQLLNFSEAMSIGPHQPEKLFGVLDMYEVLVELLPDINALYPEDAGSFIRSECHEVLRRLGDCAKATFLEFENAVASNTSSTPFAGGAIHPLTKYVMNYLRNLTDYGETLNLLLKDQHEDQNISLSPDMSQDGKENGNQSPLCSFFSMAQHFRSIASILECNLDDKSKLYKDTSLQHLFLMNNIHYMAEKAKKSELRFIYGDEWIRKHNWKFQQHALSYERSCWSSVLSLLKDEGIQNPGTHSVSISLLKERLRSFYVAFEEIYRSQTAWFIPDPELREDLQISTSQKVIQAYRTFVGRHNYKISEKHIKYSPDDLQTYLLDFFEGSPRSLPNPHWR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00619 660 PANTHER EXOCYST COMPLEX PROTEIN EXO70 72 649 IPR004140 GO:0000145|GO:0006887
Pte4g00619 660 Gene3D Exocyst complex component Exo70 84 656 - -
Pte4g00619 660 Pfam Exo70 exocyst complex subunit 279 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte4g00619 660 SUPERFAMILY Cullin repeat-like 91 648 IPR016159 -
Pte4g00619 660 Coils Coil 106 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00619 Pte-Chr4 37086528 37090034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00619 19 661 EXO70 exocyst subunit family AT3G29400 49.470 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00619 K07195 - qsa:O6P43_009152 938.717