Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00611 ATGGTGAACTCAAGAAACCGAGACATCAGTAGCGCAAGCTGCTGCACTGTCTTGCTGCTTTATCTAATTCAGCTGACTCTTTCCAGTAACGAATACACACCAGTAGAAACATTCTTCATCAATTGTGGATCCTCTGGCTCAGAAACCAATCCTTTAGACAATCAAACCTGGACAGGTGACGAAAACTCAAAGCTATATTCCCCAATAGAAACACAAACACAAAATCAGTTGCCATCATCAGTACCAGCAAAATCAATTGACCAATCTTCTTCAGATTCTCAGGTTCCGTACACTACTGCACGTCTCTCTCGTTCTTCTTTCACCTACTCCTTACCTGTCACAAATGGTCCAAAGTTTGTTCGTCTTTACTTTTACCCAACAGGTTATCCCAACTTTGACCGCTCCAAATCCTACTTCTCGGTCAGTGCAGGAAACTACACCCTTCTCAAAGACTTCAATGCTTCTGTTACAGCAGACCACCTAGGTCATGAGACCTTCAGTCAAGAGTATATTGTCTATGTCCAACAAGGGCAGAGGCTCAATTTGACGTTCACCCCAAGCAAGAATGCCCCAGATGCTTATGCTTTCGTCAATGGAATCGAGATTGTGTCCATGCCAACCGATCTTTACTACTCCAAAGCTGATGATACTGACATTGGGATTCCCTTGGTTGGAACAAGTACGTTTATTCATGTTGTAGACAGCAAAGATCTCCAGTTGCTGTACAGGATTAACGTTGGTTGGGGTCCTATTGAACCTGCAAATGACACTGGATTGTTTCGGGCATGGACTGACGACACAGGTTCCATCCTCACCGTCGGACCACGTTCTTTGCCTTATGCAACAGGTTTGCAACTCAATTATGGAGGTTATCCCAATTACACAGCCCCACCTGAGGTTTATCTAACAGCTCGGACATATGGGCAGAACCAGACAACAGATTACAACGTCACTTGGCAATTTGAGGTAGACAGTGGCTTCACTTACCTTTATAGATTACATTTCTGTGAGGTTGAGGGGGCAGTTCAAGGTGAAGGAGAAAGAGTCTTCCAGATATTCATAAACGACTTGATGGCTGAACCATATGCCGATGTCATTAAATGGAGTGGTGGCAACCTTAAACCAACTCATAGGGACTACGGAGTGCTCATGTCAAGTAGCCAAGGTAGTTCTAAGAAAGTCAACATCACTCTCAAACTGCATCCTTACACAGATCCAAATATTAGCGTATACAGAGATGTGATCTTGAATGGGATTGAGATTTTCAAACTGAGTGAAAGCAACAATCTTGGTGGACCTAATCCAGACCCTCCATCCCAATCATCAAGGCCATCCGCAGAACCCCCGACTAAGAACAACAAGAATAACAACAAGAACAAGACCATGGTTGGAGTTTTGGCCAGCACAGTTTCCGTCGTTGCTTTGATATGCCTCTGCAGTAGCATCGGGTACATCATGTTCAGACAAAGAAGGAGGAGGATGGTGGCAGCAGGCAAAGTCAACGGCAAAGACAAGTCTTCCTCTGGCGAATCATCATGGCACGGATGGGGTCCACTTTCATTTTCCACAACGAAATCAAACAAGACACGTGGGTCGTCGTCTCTGCCGTCCGAAATGTGCCGATACTTTTCTATCGCGGAAATGAAAGCCGCCACCAATAATTTCAACGACGTGTTTGTTGTTGGTATCGGGGGTTTTGGTAACGTGTACAAAGGGTACATAGAACAAGGTACAATCCCAGTTGCGATCAAGCGATTGAAAACTGGGTCCCAACAAGGGGCCCATGAGTTCAAGACTGAGATTGAGATGCTCTCCCAGCTGCGCCACCTCCACCTAGTCTCACTAATCGGGTACTGTAACGAAGACCAAGAGATGATCTTAGTCTATGATTTCATGTCCAATGGGACCTTCCGCGACCATTTGTACGGCAACGATAATCCTACTCTGTCATGGAAACAAAGGCTTCAGATTTGTATTGGAGCTGCTCGTGGGTTGCATTATCTTCATACAGGTGCGGCGCACACTATTATCCACCGTGATGTGAAGACCACAAATATCTTACTTGACGAGAAATGGGTGGCTAAGGTTTCAGATTTTGGGCTTTCAAAAATTGGGCCGACGGGTGAGTCTAAAGCGCATGTCAGTACTGTGGTGAAAGGAAGTATGGGCTACTTGGACCCGGAATACTATAGACGTCAAAGGTTGACCGAGAAATCTGATGTGTACTCTTTCGGTGTGGTACTGTTGGAAGCGTTGTGCGCAAGAGCACCTTTGCTTCGTACCGTTGAGAAGAAGCAAGTGAGCTTGGCAGATTGGGGAAGACACTGTTATCAGAAGGGAAACTTGGAGGACATAGTAGACCCAGGATTAAAGGGACAGATTGCAGCAGAGTGTTTGAAGAAATTTAGTGAAATTGCAATAAGTTGTTTGCGTGATGATGGTAGTGAAAGGCCTTCCATGAATGATGTGGTGTGGGGTTTGGAGTTTGCTCTGCAGCTGCAGGAGAATGCTGAAGAAGGTGCCAGTGGTGATGATGTGACTCGAGGTCATCAGGTGAAAGCTCAAATGGGAGTGAAGAATGATGACAGTTTCAATGAGTTTACGAACAGTAGTATGGGGCAGGTGTCTGATATAAAAAGTAGCAGCTTGGTGAGTACAACAGACACTGCAGAACCAAGTGGTGGGAACAGCGATGTGGATGGACTACTCTTGTCTAGGAACGTTTTCTCCGAGCTTATGCAACCACAAGGACGATAG 2757 0.4552 MVNSRNRDISSASCCTVLLLYLIQLTLSSNEYTPVETFFINCGSSGSETNPLDNQTWTGDENSKLYSPIETQTQNQLPSSVPAKSIDQSSSDSQVPYTTARLSRSSFTYSLPVTNGPKFVRLYFYPTGYPNFDRSKSYFSVSAGNYTLLKDFNASVTADHLGHETFSQEYIVYVQQGQRLNLTFTPSKNAPDAYAFVNGIEIVSMPTDLYYSKADDTDIGIPLVGTSTFIHVVDSKDLQLLYRINVGWGPIEPANDTGLFRAWTDDTGSILTVGPRSLPYATGLQLNYGGYPNYTAPPEVYLTARTYGQNQTTDYNVTWQFEVDSGFTYLYRLHFCEVEGAVQGEGERVFQIFINDLMAEPYADVIKWSGGNLKPTHRDYGVLMSSSQGSSKKVNITLKLHPYTDPNISVYRDVILNGIEIFKLSESNNLGGPNPDPPSQSSRPSAEPPTKNNKNNNKNKTMVGVLASTVSVVALICLCSSIGYIMFRQRRRRMVAAGKVNGKDKSSSGESSWHGWGPLSFSTTKSNKTRGSSSLPSEMCRYFSIAEMKAATNNFNDVFVVGIGGFGNVYKGYIEQGTIPVAIKRLKTGSQQGAHEFKTEIEMLSQLRHLHLVSLIGYCNEDQEMILVYDFMSNGTFRDHLYGNDNPTLSWKQRLQICIGAARGLHYLHTGAAHTIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPTGESKAHVSTVVKGSMGYLDPEYYRRQRLTEKSDVYSFGVVLLEALCARAPLLRTVEKKQVSLADWGRHCYQKGNLEDIVDPGLKGQIAAECLKKFSEIAISCLRDDGSERPSMNDVVWGLEFALQLQENAEEGASGDDVTRGHQVKAQMGVKNDDSFNEFTNSSMGQVSDIKSSSLVSTTDTAEPSGGNSDVDGLLLSRNVFSELMQPQGR* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00611 918 PANTHER OS03G0124300 PROTEIN-RELATED 15 499 IPR046957 GO:0004672
Pte4g00611 918 FunFam Receptor-like protein kinase FERONIA 527 631 - -
Pte4g00611 918 MobiDBLite consensus disorder prediction 71 93 - -
Pte4g00611 918 FunFam Receptor-like protein kinase FERONIA 632 848 - -
Pte4g00611 918 Pfam Protein tyrosine and serine/threonine kinase 561 824 IPR001245 GO:0004672|GO:0006468
Pte4g00611 918 MobiDBLite consensus disorder prediction 427 459 - -
Pte4g00611 918 Gene3D - 37 207 - -
Pte4g00611 918 Gene3D - 237 425 - -
Pte4g00611 918 FunFam FERONIA receptor-like kinase 236 425 - -
Pte4g00611 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Pte4g00611 918 SMART serkin_6 555 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00611 918 MobiDBLite consensus disorder prediction 878 894 - -
Pte4g00611 918 ProSiteProfiles Protein kinase domain profile. 555 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00611 918 Gene3D Transferase(Phosphotransferase) domain 1 632 852 - -
Pte4g00611 918 CDD STKc_IRAK 561 824 - -
Pte4g00611 918 FunFam FERONIA receptor-like kinase 37 206 - -
Pte4g00611 918 SUPERFAMILY Protein kinase-like (PK-like) 540 825 IPR011009 -
Pte4g00611 918 Gene3D Phosphorylase Kinase; domain 1 519 631 - -
Pte4g00611 918 Pfam Malectin-like domain 40 423 IPR024788 -
Pte4g00611 918 ProSitePatterns Protein kinases ATP-binding region signature. 561 584 IPR017441 GO:0005524
Pte4g00611 918 MobiDBLite consensus disorder prediction 445 459 - -
Pte4g00611 918 MobiDBLite consensus disorder prediction 878 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00611 Pte-Chr4 36871251 36874007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00611 27 919 Receptor kinase-like Gene Family AT3G51550 50.383 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pte4g00611 Malectin_like 2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00611 - - qsa:O6P43_009177 993.801