Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00602 ATGAGTTTTTTAGTTCCATGCTGTTTTGGGCTGTCGAAGGATAGTACAGATGTTTCGGAGGAGGAAATGTATACGACGATACCTGAAGAATTTTGTCAACGTTTTTCAGTATCTGAGCTTCGAAAAGCAACAAATAACTTTGACCAGTCCTTGGATCTTGCATGGGGAGTGTACAAAGGTCATATTATCATGAACGGGACCAACAAATTAGTTGTAGTCTACAATAACCAAATTCAATCCCCTCGGCACTCTTTCAGCTTCAAAACCGAAATTCAGTTTCTGTGCCAGCTTCACCATCCTAACATATTGTCCCTTGTAGGGTACTGTATACACAAAAAGGGACAAATGCTTGTGGTGGACTACATGCCAAATTTATCCTTAGACCGTCATCTGCGAGCATATGGAGCGGGCATTACTACAACTGAGCCACTTTCATGGCGAAGAAGACTTGAGATTTGCATTGGAGCAGCACGGGGGCTCCATTACCTTCACACAGGAGCCAAGTATGCTATCATTCATCGTGATGTCTCGAGCCGCACTATTCTCTTGGATGATAATTGGGTTCCCAAATTATCAGCTTTTGGATTGTCCAAAAGGGGTCCCCTTAGTCTGTCCAAGAAGTTGATCAGGTTGGATTCAGTAGTGAGAGGCAGAGGTACATATCTGGCGCCAGAGTATGCCATTCACGGTGAATTGACAGAAAAAACTGATGTGTTCCTATTTGGAATGGTGCTGTTGGAAGTAGTGTCTGCTAAAAAGCCAAATCATCAACTCCGCTTGCGTGACAGAAATAAGATGCAAACAGTATTTGACTGTGTAAGACAAGATGATAATATTGCTGACATATTGGATCCATTTCTCGTGGGGAAGATTGGATCTGAATGTTTAAATAGATATATGAGTATAGCTGAGAGATGCCTGGATTATGAAAAAAGCAACAGGCCGGCTATGGGAGAAGTGGAGGTGGAATTGGAACATGCTTTACAGCTACAGCAAAGCGCAGATGGCTTCTATGAGGATGCCAATTGCGATGGCGAGATGCCAATTTAG 1050 0.4295 MSFLVPCCFGLSKDSTDVSEEEMYTTIPEEFCQRFSVSELRKATNNFDQSLDLAWGVYKGHIIMNGTNKLVVVYNNQIQSPRHSFSFKTEIQFLCQLHHPNILSLVGYCIHKKGQMLVVDYMPNLSLDRHLRAYGAGITTTEPLSWRRRLEICIGAARGLHYLHTGAKYAIIHRDVSSRTILLDDNWVPKLSAFGLSKRGPLSLSKKLIRLDSVVRGRGTYLAPEYAIHGELTEKTDVFLFGMVLLEVVSAKKPNHQLRLRDRNKMQTVFDCVRQDDNIADILDPFLVGKIGSECLNRYMSIAERCLDYEKSNRPAMGEVEVELEHALQLQQSADGFYEDANCDGEMPI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00602 349 Pfam Protein tyrosine and serine/threonine kinase 57 322 IPR001245 GO:0004672|GO:0006468
Pte4g00602 349 Gene3D Transferase(Phosphotransferase) domain 1 122 343 - -
Pte4g00602 349 PANTHER OS07G0166700 PROTEIN 31 331 IPR045272 GO:0004714|GO:0006468
Pte4g00602 349 SUPERFAMILY Protein kinase-like (PK-like) 24 320 IPR011009 -
Pte4g00602 349 Gene3D Phosphorylase Kinase; domain 1 22 121 - -
Pte4g00602 349 ProSiteProfiles Protein kinase domain profile. 1 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00602 Pte-Chr4 36800961 36847813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00602 25 346 Receptor kinase-like Gene Family AT3G51550 39.706 9.95e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pte4g00602 PK_Tyr_Ser-Thr 4.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00602 - - qsa:O6P43_009179 274.248