Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00601 ATGAGGTTTTCAGTTCCATGCTGTTTTGGGCTGTTGAAGGATTGTACACATGTTTTGGAAGAGGAAATGTATACAACGATACCTGAAGAATTTTGTCGACGTTTTTCAGTATCTGAGCTTCAAAAAGCAACGAATAACTTTGATCAATCCTTGACTCTTGGATGGGGAGTGTACAAAGGTCATATTATCATGAATGGGACCAACAAATTAGTTGCAGTCTTCTACAATCACCAAATTCAATCCACTCGGCGCTTTTTCAGCTTCAAAACCTCAATTCAGTTTCTGTGCCAGCTTCACCATCCTAACATATTGTCCCTTGTGGGGTACTGTATACACAAAAAGGGACAAATGCTTGTGGTGGACTACATGCCAAATTTATCCTTAGACCGTCATCTGCGAGCATATGGAGCGGGCGTTACTACAACTGAGCCACTTTCATGGCGAAGAAGACTTGAGATTTGCATTGGAGCAGCACGCGGACTCCATTACCTTCACACAGGAGCCAAGTATGCTATCATTCATCGTGATATCTCGAGCCGCACTATTCTCTTGGATGAGAATTGGGTTCCCAAATTATCAGGTTTTGGATTGTCTAAAAGGGGTCCCCTTAGTCTGTCGAAGAAGTTGATCAGGTTGGAATCAGCGGCGCGAGCCAGATGTGGATATGTGGCGCCAGAGTATGACGTTCCCGGTGAATTGACAGAAAAATCTGATGTGTTCTCATTTGGAATGTTGCTGTTGGAAGTAGTGACTGCAAAATTGCCAAATCATCAACTCTGCAGACCAATTCGTAAGGAGATAACTAGTTGTCTAGTACCTGACAGAAATAAGATGCAAACAGTATTTGACTGTGTAAGACAAGATGATAATATTGCTGACATATTGGATCCGTCTCTCGTGGGAAAGATTGGATCTGAATGTTTAAAGAGATATATGAGTATAGCTGAGAGATGCCTGGATTATGAAAGAAGCAACAGGCCGGCTATGGGAGAAGTGGAGGTGGAATTGGAACATGCTTTGCAGCTACAGCAAATTGCAGATGGCTTCTACGAGGATGCCAATTGCAATGGTGAGATGCCAATCTAG 1086 0.4291 MRFSVPCCFGLLKDCTHVLEEEMYTTIPEEFCRRFSVSELQKATNNFDQSLTLGWGVYKGHIIMNGTNKLVAVFYNHQIQSTRRFFSFKTSIQFLCQLHHPNILSLVGYCIHKKGQMLVVDYMPNLSLDRHLRAYGAGVTTTEPLSWRRRLEICIGAARGLHYLHTGAKYAIIHRDISSRTILLDENWVPKLSGFGLSKRGPLSLSKKLIRLESAARARCGYVAPEYDVPGELTEKSDVFSFGMLLLEVVTAKLPNHQLCRPIRKEITSCLVPDRNKMQTVFDCVRQDDNIADILDPSLVGKIGSECLKRYMSIAERCLDYERSNRPAMGEVEVELEHALQLQQIADGFYEDANCNGEMPI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00601 361 PIRSF ILK 19 279 - -
Pte4g00601 361 PIRSF ILK 304 347 - -
Pte4g00601 361 Pfam Protein tyrosine and serine/threonine kinase 57 334 IPR001245 GO:0004672|GO:0006468
Pte4g00601 361 ProSiteProfiles Protein kinase domain profile. 47 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00601 361 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Pte4g00601 361 Gene3D Transferase(Phosphotransferase) domain 1 123 354 - -
Pte4g00601 361 SUPERFAMILY Protein kinase-like (PK-like) 23 332 IPR011009 -
Pte4g00601 361 PANTHER OS07G0166700 PROTEIN 31 343 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00601 Pte-Chr4 36740822 36742610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00601 26 346 Receptor kinase-like Gene Family AT5G39000 42.769 2.74e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pte4g00601 PK_Tyr_Ser-Thr 2.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00601 - - qsa:O6P43_009179 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00601 4 36740822 36742610 Pte4g00601 4 36740822 36742610 RCT