Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00598 ATGAATAATTTCCAAATGTATCGGCACATCATGAGTCCTGGTTGGACATTAGGATGGACATGGGCAAAAAAAGAAGTGATATGGACAATGAATGGAGCTCAAACAACTGAACAAGGAGACTGTTCTAAGTTTAAAGGCAATATTCCTCACTGTTGCAAGAAAACCCCAACTGTTGTGGACTTGCTTCCTGGTGTTCCTTACAATCAACAATTCACAAACTGCTGTAAAGGTGGGGTGGTGGCTGCATGGGGCCAAGATCCCAGTGCTGCAGTCTCAGCCTTCCAAGTAAGTGTGGGGCAAGCAGGCACTTCGAACAAGACAGTGAAATTGCCAAGGAATTTCACTCTCCTAGCTCCAGGACCAGGCTACACTTGTGGCCCTGCAAAAATTGTGCCTTCCACCAATTTCCTAACACCTGATCGTCGCAGAAAGACTCAAGCACTGATGACATGGAATGTGACATGTACATATTCACAGTTTTTGGCTAGGAAGAATCCAAGTTGCTGTGTCTCTTTGTCATCCTTCTACAATGACACGATCACTCCCTGCCCCTCGTGTGCTTGTGGATGCCAAAACAAACACAGTTGTGTTCAGAGAGACTCTAAGATACTGAATGTGGTGGGCGTAAACACCCCCAGAAAAGATGGCTCCCCATTGCTGCAATGCACACATCACATGTGCCCAGTCCGGGTGCACTGGCATGTCAAGGTCAACTACAAGGAGTATTGGCGTGTCAAGGTTTCAATCACTAATTTCAACTACAGGATGAATTACACTCTCTGGAGTCTGGTTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTTGTTCCCTACGGATCCATAAATGACACAGGCATGTTTTATGGGATGAAATACTATAATGACTTATTGATGGAAGCTGGACCGTCTGGGAATGTACAGTCAGAGATACTTATGCAGAAGGACCTGAACACTTTCACATTTAAGCAGGGATGGGCATTTCCTCACAAAGTCTACTTCAATGGTGATGAGTGTATGCTACCCCCACCTGATACATACCCTTTCCTACCAAACTCAGCCAGCAGAAATACATATCCCCTGTATTCATTGCTTGTTTCCCTTCTTGTTCTGCTGGTGGTCAGATGGTAA 1155 0.4494 MNNFQMYRHIMSPGWTLGWTWAKKEVIWTMNGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSAAVSAFQVSVGQAGTSNKTVKLPRNFTLLAPGPGYTCGPAKIVPSTNFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNDTITPCPSCACGCQNKHSCVQRDSKILNVVGVNTPRKDGSPLLQCTHHMCPVRVHWHVKVNYKEYWRVKVSITNFNYRMNYTLWSLVVQHPNLNNVTQVFSFDYKPLVPYGSINDTGMFYGMKYYNDLLMEAGPSGNVQSEILMQKDLNTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSASRNTYPLYSLLVSLLVLLVVRW* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00598 384 PIRSF COBRA 1 384 IPR006918 GO:0010215|GO:0016020
Pte4g00598 384 PANTHER PROTEIN COBRA 1 376 IPR006918 GO:0010215|GO:0016020
Pte4g00598 384 Pfam COBRA-like protein 1 158 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00598 Pte-Chr4 36712020 36715877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00598 1 367 COBRA Gene Family AT5G60920 70.053 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00598 - - qsa:O6P43_004382 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00598 4 36712020 36715877 Pte4g00598 4 36712020 36715877 RCT