Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00586 ATGGTGGGAATGAATCGAATGATGAGTTGGGGAATTCATGAGCAAGGTTGGAGGAAGGGTCCTTGGACCCCTGCAGAGGATAAGTTACTCATTGTGTATGTAAGCAAGCATGGAGAGGGAAGGTGGAGCACAGTGGCTAGGTGTGCAGGCCTGAATAGAACTGGCAAAAGTTGCAGGTTGAGGTGGGTCAATTATTTAAGGCCTGGTCTCAAGAGAGGTCACTTAACTCCTCAAGAAGAAGGCATCATCATTGAACTGCACGCCCTGTGGGGCAACAGGTGGTCAATCATTGCAAGATACTTGCCTGGAAGAACTGACAATGAGATTAAAAATTACTGGAGAACCCATTTCAAGAACAAAGTACAGAAGCAAGATAAGAGAAGACAGATGCTAAACGGAAAAAGAGATCATCCGCAGCTGCAGTTTTTACAAAAAGAGCAGCAACCAAGAGAACATGACATGCAAAAGGTCCAAGACATATTTAATGGCACCACTGAGAATGTAAAACCTATGATTGAGACACAAGAGAAACAAGATATGCTCTCTGCTTATCCAGCAATGGAGGACAAGTGCGTGCCTTTCATGTATTATCAAGATGTTTCCCCAACATGGTTTGATACTGCAGAATATATGGACTTGTGGGGTGGTTTGTGGAGCCTTCATGAGCCATATGGAAGCAGCAATTATGACATCAACAATAAATCAGCCACTCCTAATTAA 720 0.4347 MVGMNRMMSWGIHEQGWRKGPWTPAEDKLLIVYVSKHGEGRWSTVARCAGLNRTGKSCRLRWVNYLRPGLKRGHLTPQEEGIIIELHALWGNRWSIIARYLPGRTDNEIKNYWRTHFKNKVQKQDKRRQMLNGKRDHPQLQFLQKEQQPREHDMQKVQDIFNGTTENVKPMIETQEKQDMLSAYPAMEDKCVPFMYYQDVSPTWFDTAEYMDLWGGLWSLHEPYGSSNYDINNKSATPN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00586 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 66 IPR017930 -
Pte4g00586 239 SUPERFAMILY Homeodomain-like 16 113 IPR009057 -
Pte4g00586 239 CDD SANT 76 117 IPR001005 -
Pte4g00586 239 SMART sant 71 119 IPR001005 -
Pte4g00586 239 SMART sant 18 68 IPR001005 -
Pte4g00586 239 FunFam Myb transcription factor 19 71 - -
Pte4g00586 239 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Pte4g00586 239 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Pte4g00586 239 Gene3D - 19 71 - -
Pte4g00586 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Pte4g00586 239 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Pte4g00586 239 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Pte4g00586 239 Gene3D - 74 151 - -
Pte4g00586 239 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 177 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte4g00586 239 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00586 Pte-Chr4 36520609 36521909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00586 16 222 MYB Transcription Factor Family AT3G30210 54.884 2.29e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte4g00586 Myb_DNA-binding 6.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00586 K09422 - qsu:112004763 270.396