Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00566 ATGGCGATCGGTAATATTGCTCCCAAGAAGGAAAAAAAATCAAGGAAGGGGAAGCAAGTTGTGAACGACAACACTCCCTTGTTGCCCAAAAGCCATTTGGATGATGGTAGTAGCTTCGACGAATTTAATGGGGCTTCGTTTTCTGGGGCTGTCTTCAACTTATCCACCACAATTATTGGTGCTGGTATCATGGCTTTGCCTGCTACTTTGAAAGTATTGGGGCTGCTACCAGGTCTGGCTATGACGGTCTTCATGGCATTCTTGACTGAAAAGTCAATTGAATTCTTAATAAGGTTTAGCAGAGAGGGAAAATCATCATCTTATGGAGCTTTAATGAATGAATCTTTTGGGAAGATTGGGAAAGCTCTGGTGGAGATATGTGTTATAATCAACAATATTGGGATGCTGATTGTGTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCATCTAGTGGACTCCACCATGCTGGTCTTCTTGAAGGTTGGTTTGGGGAGCACTGGTGGACTAGCCGTTTCGCTGTGCTTCTTATCTCAACAATTGCAATATTTGCACCATTGGCTAGCTTCAAGAGAATCGATTCATTGAGATTCACATCTGCCTTATCAGTTGCACTTGCAGTTGTTTTTCTTGTAATTACTATTGGAATTTCAATAATCAAGCTTGTCAGTGGAGGTGTCCAGACACCTCGATTCCTACCTGTTATCACCGATTTGACATCAGTCTTCAAACTTTTCACAGTAGTTCCTGTGTTTGTGACTGCCTTTATTTGCCATTATAATGTCCACAACATAGACAACGAACTTGAAGACTCTTCACAGTTGCATGGGGTTGTACGTACTGCTCTTGGTCTATGCTCCTCTGTATACTTGATGACAAGCCTGTTTGGGTTCCTTCTTTTTGGGGATGCAACTCTTGATGATGTGCTGGCCAACTTTGACTCTGACCTTGGCATTCCATTTGGTTCCCTGCTTAATGATGCTGTTCGTGTCAGCTATGCTGCACATCTCATGCTTGTATTTCCAATTGTCTTCTATCCACTGAGGATCAACATAGATGCCCTTCTGTTTCCATCTGCAAGGCCTATGGTTTTGGACAATGTGAGATTTGCGTCTGTCACCACTACACTCATTTGTGTCATCTTCCTTGGGGCGAATTTCATACCCAGCATCTGGGACGCTTTTCAGTTTACTGGGGCTACTGCTGCAGTCTGTCTTGGATTCATATTTCCTGCTGCCATCACTCTAAAGGATCGATACAGCATAGCAACGAAGACAGACAAGATGATATCAATCTTCATGATCTTTTTGGCTGTTGTATCAAACCTCATAGCAATATATAGTGATGCCTATGCATTGATAAAAAAGAATTCTCCAAAGCGTGAATGA 1392 0.4217 MAIGNIAPKKEKKSRKGKQVVNDNTPLLPKSHLDDGSSFDEFNGASFSGAVFNLSTTIIGAGIMALPATLKVLGLLPGLAMTVFMAFLTEKSIEFLIRFSREGKSSSYGALMNESFGKIGKALVEICVIINNIGMLIVYMIIIGDVLSGTSSSGLHHAGLLEGWFGEHWWTSRFAVLLISTIAIFAPLASFKRIDSLRFTSALSVALAVVFLVITIGISIIKLVSGGVQTPRFLPVITDLTSVFKLFTVVPVFVTAFICHYNVHNIDNELEDSSQLHGVVRTALGLCSSVYLMTSLFGFLLFGDATLDDVLANFDSDLGIPFGSLLNDAVRVSYAAHLMLVFPIVFYPLRINIDALLFPSARPMVLDNVRFASVTTTLICVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPAAITLKDRYSIATKTDKMISIFMIFLAVVSNLIAIYSDAYALIKKNSPKRE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00566 463 PANTHER AMINO ACID TRANSPORTER 39 442 - -
Pte4g00566 463 MobiDBLite consensus disorder prediction 1 26 - -
Pte4g00566 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00566 Pte-Chr4 36246811 36250492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00566 3 462 Amino Acid or Auxin Permease AAAP Family AT3G30390 71.367 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00566 K14207 - qsa:O6P43_009218 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00566 4 36246811 36250492 Pte4g00566 4 36246811 36250492 RCT