Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00557 ATGGAAGGCCATCCTGAGAATTATCAGCCCCCTAAGTCCTCAGAAGTTACAGCTGGAACTGATCCCTCGTCCAACTTAGATATTGAGAAGCAAAAGCAAGAGGAAGAGAGAGTCATAGAGGTTGTTGATTATTCCCAGAGAGCACAGTGGCTTAGAGCAGCTGTGTTAGGTGCTAACGATGGTTTACTGTCCACTGCTTCCCTTATGATCGGCGTTGGAGCTGTGAAGAAAGATGTGACGACCATGGTATTAACTGGGATTGCTGGTTTGATTGCTGGGGCTTGCAGTATGGCCTTAGGAGAGTTTGTCTCTGTCTACTCACAATATGATATTGAATTGGCTCAAATGGTAAGGGAAAACAAAGTTGATAAAGAAAAGAAAGAAAAGTTACCAAACCCTTATCATGCAGCCTTGGCTTCTGCTTTAGCTTTTGCTGTAGGGGCACTTGTCCCACTTCTTGGTGCAGCATTTATAGAGAATTATAAGGTGAGATTGGGTGTTGTGGTAGGGGTTGTGACATTTGCATTAATAGTTTTTGGTGCATTGGGTGCAATTTTAGGGAAGGCACCTGTGATCAAATCATCTTTGAGGGTTTTGGTTGGGGGGTGGCTAGCTATGGCCATTACTTTTGGGTTGACCAAAGCTGTAGGTTCAATGGAGTCTAGTTTCCGCCATTGA 678 0.4425 MEGHPENYQPPKSSEVTAGTDPSSNLDIEKQKQEEERVIEVVDYSQRAQWLRAAVLGANDGLLSTASLMIGVGAVKKDVTTMVLTGIAGLIAGACSMALGEFVSVYSQYDIELAQMVRENKVDKEKKEKLPNPYHAALASALAFAVGALVPLLGAAFIENYKVRLGVVVGVVTFALIVFGALGAILGKAPVIKSSLRVLVGGWLAMAITFGLTKAVGSMESSFRH* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00557 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 216 IPR008217 GO:0005384|GO:0030026
Pte4g00557 225 MobiDBLite consensus disorder prediction 10 26 - -
Pte4g00557 225 Pfam VIT family 118 213 IPR008217 GO:0005384|GO:0030026
Pte4g00557 225 Pfam VIT family 51 125 IPR008217 GO:0005384|GO:0030026
Pte4g00557 225 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00557 Pte-Chr4 35862763 35863515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00557 23 218 Nodulin-like Gene Family AT3G43660 68.367 2.06e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00557 K22736 - qsa:O6P43_012275 273.863